Gene Dvul_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1902 
Symbol 
ID4663818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2216900 
End bp2217430 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID639820143 
ProductHAD family hydrolase 
Protein accessionYP_967345 
Protein GI120602945 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.94707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACG TTCCATCGCA TCCGTCATCA TCTACGCATG ACAAGGTACT GCTCTTCGAC 
TGGGGCGGTA CGCTCATGCG TTCCATGCCC CGGTGGCAGG GGACATCTGC CGGATGGACC
CGTGAAGAGG CCATCCCGCA TGCGCCCGAA ACATTGCACG GTCTCGCCGC GGGCTGGCGC
ATGGGCCTCG CCTCCAACGC ATGCGAATCC GACGAAGACC CCATTCGCGC ATCCCTCGAC
ACCATCGGCA TCGGAAATCT CTTCGAGCAC ATCTTCACGT GGCGTAGTGT GGGCAGTCCC
AAGCCATGGG GCCCGTTCTG GAGTCATGTC CTGCGCAACC TGAAGGTGGC GCCTGCGAGG
GTGGTCATGG TCGGTGACGA CTGGATGGGC GACGTATGGG GCGCCCGACA GGCGGGGCTG
TGCGGCGTAT GGTTCAACCC GCATAGCGAC GAAGTGCGTG AACGCGAAGG CGTTCGCACC
ATACACGACT TCAGGTCACT GCCTGACGTC CTCGCAGACC TCGGTTTCTA G
 
Protein sequence
MPDVPSHPSS STHDKVLLFD WGGTLMRSMP RWQGTSAGWT REEAIPHAPE TLHGLAAGWR 
MGLASNACES DEDPIRASLD TIGIGNLFEH IFTWRSVGSP KPWGPFWSHV LRNLKVAPAR
VVMVGDDWMG DVWGARQAGL CGVWFNPHSD EVREREGVRT IHDFRSLPDV LADLGF