Gene Dvul_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1803 
Symbol 
ID4662584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2107643 
End bp2109403 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content62% 
IMG OID639820044 
Productphage tail X family protein 
Protein accessionYP_967247 
Protein GI120602847 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.411442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAG ATCGATATCA GCTGCGATGC GGGCTCTCCC CGCCTTGCGC CTGGACCCGC 
CCCGTTCACG CCACGAACCG GAATACGCCA CGAGAGACGT CCATGCAGTA CCTTGAAATG
CTCGGCCTCG CGCAGGAACC CTTCTCGACT TCGCCCGACC CGCTGGCTTA CTACCGCGCG
CCGGAACATG AACACTGCCT GCACAGGCTC GAGGTCTCCA TACGCCTGAA GCGCGGGCTC
AATGTGGTCA TCGGCGATGT GGGGACAGGC AAGAGCACAC TTTCACGATG CCTGTTGCGG
GCACTGGACG GGCAGGAAGA CATCATTCCC CATCTCATCC TCGACCCCGG ATTCGAATCG
GCGGATGAGT TCGCACGGTA CATATGCAGG TTGCTGGCGG ATGGCCCCGT GCCCGACACC
CTCCCCAGAC GCGACTGCAT CGAAGCCATC CAGAACGCGC TGTTCAGCCT TGCCGTGGAA
CGCGGGCGTA TCGTGCTGCT CTGCATCGAT GAAGGGCAGA AGCTGGCACC CGACTGCCTC
GAAGTGCTGC GCGAGTTGCT CAACTACGAG ACCAACACCG AGAAGCTGTT GCAGATCGTC
ATCTTCGGGC AACGCGAACT TGAAGAGGTC ATCGACGGGC TGCCCAACTT CAAGGACCGC
ATCAACGAGT ACCTAGTGCT GCGCCCTCTC GACAGACGGG AGACCATCCG ACTTGTGCGG
CACCGTCTGC GACTGGCAGG CGGCCCCGCC GGAGAACGGC TGTTCACCCT TGGTGCGCTG
CTGGCGGTGC ACAGGGCCAC ACGCGGTTAT CCGCGACGCA TCATGCGCCT TTGTCACCAG
CTGGTGATGA CGTTGCTCAT CACCAACAAG CCGCGCATCA CCGCCCGTAG CGTGCGCGAC
TTCCTGCAAC GCGACAAGGC CCTTGGACCA AAACGTACGC CGTATCTTCG CCTGATTGGT
GCGACAGGCG TCGCGGCGGC CCTCGTCGCA CTCTTCGTGA TGCGCCCCGC GCAGGTCGAA
CAGACGCTCA CGACGATGAC AGGACCGGTG TTCTCGAACA TACGGGCGAC GTTGGCCCCC
CATCCGGCGC TGTCAGGCAC GACAGGCCTC ACTGAGGGAC AGCACCAAGC CCTTCCGAAC
GATGCAGCCC CCTTTGTCCC GAAGAGCGAA CAGAATGGAC GGAACACGCC ACAGGAGGCA
CGGGGCATGG CCTCCGACCA GCCTGTGGCA TCGATCGAGT CAGGGACGAA TGGTATCGGC
GGACTTGAGA CAGCCACGTC GGCATCGTCG GTAACGCCCC CCGAAAGGTT GGGGGCGCTC
GTCCTGCCAC GGGGCGAGAC CATGTTGCGT CTGCTGGAGA CTGTCTATGG CCGGGCTGGC
GGCGTACTCG ACAAGGTTCT CGAAGCCAAC CCCGGCATCA CCAACCCGAA CATGCTGCCC
ACAGGAACCA TCCTCACCCT GCCCGCCTTG CCGCTCACAC GTGGAGAGGC CGTGAACGGA
CTGAGTCTTG CCGTGCTCTC CAGACACGAT TCCCTTGAAA CTGCGTATGC CACCTACAGA
AGCACTGCGA ACAGACAGGA CTTGATGGTC GTTCCGGTCT GGATGCCCCG GAACGGCCTC
ACATTCATGG TCGCGCTCGA AAAACGCGAC GCCACGGAAA AGGATGTCCG GACCATGACC
CGTAGCGGGA AACGAGATGC CGCCCCGTTC CTCCTGCACA ATCTCCCCCC TGAGACGATC
ATCTATCGAC GCATTCCCTG A
 
Protein sequence
MDEDRYQLRC GLSPPCAWTR PVHATNRNTP RETSMQYLEM LGLAQEPFST SPDPLAYYRA 
PEHEHCLHRL EVSIRLKRGL NVVIGDVGTG KSTLSRCLLR ALDGQEDIIP HLILDPGFES
ADEFARYICR LLADGPVPDT LPRRDCIEAI QNALFSLAVE RGRIVLLCID EGQKLAPDCL
EVLRELLNYE TNTEKLLQIV IFGQRELEEV IDGLPNFKDR INEYLVLRPL DRRETIRLVR
HRLRLAGGPA GERLFTLGAL LAVHRATRGY PRRIMRLCHQ LVMTLLITNK PRITARSVRD
FLQRDKALGP KRTPYLRLIG ATGVAAALVA LFVMRPAQVE QTLTTMTGPV FSNIRATLAP
HPALSGTTGL TEGQHQALPN DAAPFVPKSE QNGRNTPQEA RGMASDQPVA SIESGTNGIG
GLETATSASS VTPPERLGAL VLPRGETMLR LLETVYGRAG GVLDKVLEAN PGITNPNMLP
TGTILTLPAL PLTRGEAVNG LSLAVLSRHD SLETAYATYR STANRQDLMV VPVWMPRNGL
TFMVALEKRD ATEKDVRTMT RSGKRDAAPF LLHNLPPETI IYRRIP