| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1571 |
|---|
| Symbol | |
|---|
| ID | 4664090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1862292 |
|---|
| End bp | 1865186 |
|---|
| Gene Length | 2895 bp |
|---|
| Protein Length | 964 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639819808 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_967015 |
|---|
| Protein GI | 120602615 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.453782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGAC CTTCATTCCG CCTGCAACAT CTCATCGTAG CAGCTGGCTT TCTTATTCTT
GCCCTCGCTG GTTTGTTCAC AACGGGCATG TATTTCATGC GCTCGGACAA GACCATCACG
GAAGCGCGCA ACAGCATATT CACTCCGACA ATGGGAGAGG CCCATGCACG CCTCGACCTT
CTCTTCACAC CGGCCGACAC AACGTTGCAG CTCGTAACCA TACATTCTGA AAAACCTTAC
TTTTTAAAAA CAGATGCAAC GACGATTCCG ACATCTCTGA CGAAGACACT CGATAGCGCA
CGTTTCATCA CGTCAATATA CACGGGATAT GATGACGGGC AGTATTTCAT GATACTTCGC
AGCAACAAGC AAGACGACCT CCATAAAATG GCTCCTGACG ACACCGCATA CATACTTCAC
ACTGTAACGA TTGAAGAACA CGATTACAAA AGACTTTTAA GATTCTTTGA CAAGGATCTT
AATCTCATAA AAACAAGTGA CATATCAGAC AGAGCTCCTG TTTTCGACCC CAGAGAGCGA
CCGTGGTACG GTACGGCGAC GCAAGATGAT GCTCTGCATG TGACCATGCC ATACCGTTTT
GCTTCCTCAG GAGAATTCGG CATTTCATTA TCGCGCCGCC TTCAGAATCT GGACGGGGTC
GCGGGGGCCG ATATCAACCT AGAATCACTG ATAGGTGCCC TCGCCACACT GAAGCCGACG
CCCGAGGCGA GCATCGCCCT CATTGATGCA ACAGGGAACA TCCTTGCCTG TAGTGACGCA
AAAGGGCTTG CCAGACGCAG TGAGCAGCAT CCCCTGTCGT GTGGCCCTCT CTCGAAGGCT
ACGGCTGACG AGTTGGTCAT GGCAGGAAAG ACGGCCCCCC AGTCGCCGAG GTTCAGGCGA
ATCGTCACCG ACGACGGGGC ATGGGTTGCG GGAGGTGAAA GCCTTCCGGA ACTGGGAGCA
AACGGCGTCT CCATGGTGCT GGCTGTCCCT GAAGACGCCC TTGTCGCCGG GCTGCGCACG
ACCCGGAACG ACACGCTCCT CTTGCTGGCA GGGGGATTCA TCCTGCTGCT GCCCGCCCTT
TTCTACGGAG CGCATCTAGT GACATCCCCA CTGCAATGTG TCGCCAGAGA AGCCGAACGC
GGACGAAAGT TCGACTTCAC GGCTGGTGAG TCCACGCACT CCGTGATCAC CGAGATCAAT
GATCTCGCAC TTTCGGTCGA CCACATGCAG CATACCATCC GCAAGTTCAT GCAACTGGCG
AAGAGCGTCT CGCGCATTCG TGATTTCGAC AGGCTGGTGC CCCTTCTCAC ACAGGAAATG
CAGCAGGCGA CCGCGACCCA GGCGGTTCTT CTTTACATGC CGGACAAGGA CCATACGCTT
CGTCTCTGGT CCGGCTGCGG CATCGGTGGT GAATGCCTTG GACATGACGA AAGTGAAGCC
CTTCCGCCGA CAACAGCCGT CCCCCAAGGC AAGATTCCCA TCCGCACCGG GGGACTTCCT
CCCGAAGACG CCTGCCATCG TCATATCAGC ACACTGTTGA GCGGCACGGA CGCGCAGCAC
CAGCACTGGT TCGCAGCCGT CACCCTCCGG GACAAGCGAG ACGCTGTACT CGGCGAATTG
CTCGTCATCG ACCGGGTACC TTTCAGTCAG GAACGCCTTG CCTTTCTCCG CGCCACTTCA
GGAGTTGTAG AGGTGGCACT GGACAACGAC CGCATGGTCA AGACCCAGAA GGAACTCTTT
GCGGCCTTCA TACGGCTTCT GGCACAAGCC ATCGACGCCA AAAGCCCATA CACCGGCGGG
CATTGCACAC GGGTCCCCAT ACTCTCGCGC CTGCTTGCGG AAGCAGCCAG CGACACCCGG
CAGGGTGCCT ACGCCAGCTT CGGCATGACG AATGAGTCGT GGGAAGAGTT GTACCTTGCC
TCATGGCTGC ATGACTGCGG TAAGGTAACC ACCCCGGAAT TCGTGGTGGA CAAGGCGACG
AAACTGGAAA CCATCCACAA CCGCATCCAT GAAATCAGAA CGCGCTTCGA GGTCATCAAG
CGTGATGCGC ATATCGCCTA CTGGAAAGGA GTGTCCGAGG GGGGGGACAG GGCGGCACTA
CAGAAAACGC TGCAAGACGA GTTGCGCACA CTTGATGACG ATTTCGCCTT CGTCGCGGCG
TGCAACACCG GAGAGGCACC TGTAGACGAT GCGGCGCGCC AGCGTTTGCG AAACATCGCG
GAAAGGACAT GGGAAAGGAC ACTCGACGAC ACGCTGGGAA TCTCATGGGC GGAACGTGAA
CGGAAAGAGC CCGACCATCC CCTGCCTCCC GTCATGGAAA AGCTCTTGTG TGACTCGAGC
GCCTTCGTCG TTAAGCCTGA TGCAGTGTCA CAAGAGACGG AGGACAGGTG GGGCTTCGAC
ATGCCCCGCC CCGAAGTGCT GTACGACAGG GGAGAACTGC ACAACCTGTC CATTCCGTGG
GGAACGCTCA CCAGCGAGGA GCGTTACAAG ATCAACGAGC ACATCATCCA GACCATCATG
ATGCTCTCCG AACTTCCGTT TCCGGCGCAT CTCGAGAATG TCCCGGAAAT CGCCGGCGGG
CATCATGAAC GCATGGATGG CACTGGATAT CCGCGCAGAA TCAAAGGAGA GCTGCTCCAT
CCTCTGGCGC GCATCATGGC AGTGGCAGAC ATCTTCGAAG CGCTGACAGC ACCCGACAGA
CCCTACAAGA AGGCAAAAAC CCTCTCACAG GCCATGAACA TCATGGTGGG CATGGCCAAA
AGCGGCCACA TCGACAGGGA ATTGCTCTGC ATCTTCATCC GTGAAGAAGT CTATCGCGCC
TACGCAGAAA ACCATCTGCC GGAATGGCAA CGTGACGCCG TAGACGCTGA GGCACTGCTA
CGCGACCTCG GCTGA
|
|---|
| Protein sequence | MSRPSFRLQH LIVAAGFLIL ALAGLFTTGM YFMRSDKTIT EARNSIFTPT MGEAHARLDL
LFTPADTTLQ LVTIHSEKPY FLKTDATTIP TSLTKTLDSA RFITSIYTGY DDGQYFMILR
SNKQDDLHKM APDDTAYILH TVTIEEHDYK RLLRFFDKDL NLIKTSDISD RAPVFDPRER
PWYGTATQDD ALHVTMPYRF ASSGEFGISL SRRLQNLDGV AGADINLESL IGALATLKPT
PEASIALIDA TGNILACSDA KGLARRSEQH PLSCGPLSKA TADELVMAGK TAPQSPRFRR
IVTDDGAWVA GGESLPELGA NGVSMVLAVP EDALVAGLRT TRNDTLLLLA GGFILLLPAL
FYGAHLVTSP LQCVAREAER GRKFDFTAGE STHSVITEIN DLALSVDHMQ HTIRKFMQLA
KSVSRIRDFD RLVPLLTQEM QQATATQAVL LYMPDKDHTL RLWSGCGIGG ECLGHDESEA
LPPTTAVPQG KIPIRTGGLP PEDACHRHIS TLLSGTDAQH QHWFAAVTLR DKRDAVLGEL
LVIDRVPFSQ ERLAFLRATS GVVEVALDND RMVKTQKELF AAFIRLLAQA IDAKSPYTGG
HCTRVPILSR LLAEAASDTR QGAYASFGMT NESWEELYLA SWLHDCGKVT TPEFVVDKAT
KLETIHNRIH EIRTRFEVIK RDAHIAYWKG VSEGGDRAAL QKTLQDELRT LDDDFAFVAA
CNTGEAPVDD AARQRLRNIA ERTWERTLDD TLGISWAERE RKEPDHPLPP VMEKLLCDSS
AFVVKPDAVS QETEDRWGFD MPRPEVLYDR GELHNLSIPW GTLTSEERYK INEHIIQTIM
MLSELPFPAH LENVPEIAGG HHERMDGTGY PRRIKGELLH PLARIMAVAD IFEALTAPDR
PYKKAKTLSQ AMNIMVGMAK SGHIDRELLC IFIREEVYRA YAENHLPEWQ RDAVDAEALL
RDLG
|
|---|
| |