Gene Dvul_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1501 
Symbol 
ID4662273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1790135 
End bp1790572 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID639819734 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_966945 
Protein GI120602545 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.021335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00841376 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGA AGGATAACGT TGAAGCGAGG GTAGGGGTCA TTATTGTTAC CCACGCTGAC 
TATGGCAGTG CCCTTCTGCG TGCCGCAGAG TTCATTCTGG GGGCACAGAG CGACTGCACG
TCCATCAGTA TCGACGTTTC GCAGGAGGTG GGCGAGACGG TGACCCGCCT CAAGGAGGCT
GTCGGCAGGC TTGACAAGGG AAACGGGGCG ATCATTCTCA CCGACATGTT CGGCGGCACG
CCCACGAACC TCAGCCTGTC GCTGTTGGCG ACGTCCAATG TCGAGGTCGT CACTGGGGTG
AACCTGCCCA TGCTGCTGAA AGTCTTCGGC AGCCGCACCA TGCCCTTGGC CCAGCTTGCT
GCTGAAGCGG GAGAGGCGGG CGGAAAGGGT ATCATCGTTG CCGGGCAGAT GCTCCGCAGC
AAGACCCGGA ATGGCTGA
 
Protein sequence
MTEKDNVEAR VGVIIVTHAD YGSALLRAAE FILGAQSDCT SISIDVSQEV GETVTRLKEA 
VGRLDKGNGA IILTDMFGGT PTNLSLSLLA TSNVEVVTGV NLPMLLKVFG SRTMPLAQLA
AEAGEAGGKG IIVAGQMLRS KTRNG