Gene Dvul_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1401 
Symbol 
ID4665013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1702167 
End bp1703402 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content61% 
IMG OID639819632 
Productrecombination factor protein RarA 
Protein accessionYP_966846 
Protein GI120602446 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAC GCCAGCCGCT TCCCGAACGC CTGCGCCCCA CTGTGCTTGA AGGTTTCGTG 
GGGCAGACGC ACCTCACGCA GCGCATCGAG GCGCTGTTGC GTGCCAACAG GTTGCCCAGT
CTGCTGCTGT TCGGTCCGCC GGGGTGCGGC AAGTCGACTC TCGCCCTGCT GCTGGCGAAG
GCCCGAAGCG CCAATGTGCT TCGCCTCAGC GCCCCCGAGG CTGGACTTCA ACACCTTCGC
AAACAATTGC ACGGCGTGGA CATTCTTGTT CTTGATGAGC TGCACCGTTT TTCGAAGGCA
CAGCAGGACT TCTTTCTGCC TTTGCTCGAG TCGGGCGACA TCACCATGCT CGCCACCACG
ACCGAGAACC CATCCTTCAG TGTCACGCGG CAGCTTCTTT CCCGGCTGCA CGTCCTGAGA
CTGCGCCCGC TTGGCAGGGC CGAGCTTCTT GAGTTGGGAC GCCGTGGGGC CGTGGCGCAA
GAGGTACAGA TTGAAGATGA CGTGCTCGAC CTTCTGGCCA GCATGTCGCA CGGTGATGCC
AGAACCATGC TCAATCTGCT TGAGTATGTG GCTGCACTTC CGGAAGACAA GCGCGACATC
GAAGGTGTCC GCAGCGCCAT GCCGGAAATC GTCAGCCGCC ACGACAAGGA TGGCGACAAC
CATTATGAGC TGGCATCGGC CCTCATCAAA TCCATCCGTG GCAGCGACCC GGACGCCGCA
CTCTACTATC TTGCCTGCCT GCTCGAAGGT GGCGAAGACC CGCGTTTCGT CTGCCGCAGG
CTCATCCTCT CCGCTTCGGA GGACGTAGGC CTTGCCGACC CGCAGGCTCT TCCCCTTGCG
GTGGCCTGTA TGCAGGCAGT GGAGTATGTC GGCATGCCCG AAGGGTTCAT TCCCATGGCG
CAGACCACTG TGCATCTGGC CCTTGCCCGC AAGAGCAACT CGACCTACGC CGCCTACATC
AACGCAGCAC GGGAACTGAA AACGCAAGGC CGTAAGGGTG TTCCGTTGCA TCTGCGCAAT
CCTTCCACAC GGCTGCAAAA GGAATGGGGC TATGGCAAAG GGTACAGGTA TCCCCATAGC
TACCCCGAAG GCTGGATAGA GCAGGAATAT CTCCCCGAAG GGCTGGAGGA CAGACGATTC
TACGCACCCC GCGAAAATGG CGAAGAGCCC AGACTCTCGG CATGGTGGCG CAAGCTTCAG
CGGCAGCGCC CACCCCGCAG GGGTTCCGGA GAATGA
 
Protein sequence
MSVRQPLPER LRPTVLEGFV GQTHLTQRIE ALLRANRLPS LLLFGPPGCG KSTLALLLAK 
ARSANVLRLS APEAGLQHLR KQLHGVDILV LDELHRFSKA QQDFFLPLLE SGDITMLATT
TENPSFSVTR QLLSRLHVLR LRPLGRAELL ELGRRGAVAQ EVQIEDDVLD LLASMSHGDA
RTMLNLLEYV AALPEDKRDI EGVRSAMPEI VSRHDKDGDN HYELASALIK SIRGSDPDAA
LYYLACLLEG GEDPRFVCRR LILSASEDVG LADPQALPLA VACMQAVEYV GMPEGFIPMA
QTTVHLALAR KSNSTYAAYI NAARELKTQG RKGVPLHLRN PSTRLQKEWG YGKGYRYPHS
YPEGWIEQEY LPEGLEDRRF YAPRENGEEP RLSAWWRKLQ RQRPPRRGSG E