| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1301 |
|---|
| Symbol | |
|---|
| ID | 4662447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1589952 |
|---|
| End bp | 1590947 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639819532 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_966747 |
|---|
| Protein GI | 120602347 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.298458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.144882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAA GACGAACTGA CCCCGGCAAC GGTCATGAGC GTGAAAAGCT CATCGCCGAA
CTTGAACGCC TTCGGGCGGC CATCGCCGCC ATGGACGAGA CCGTCCACGA AGGCGGCGGT
ACGGTTGTGT CTTCACGGCC GAACGCGGAC ACAGACGCCG TCAGCCTCCC CGTGCAGCCT
TGCGTGATGG ACAGCCCAGA GGAAGCAATG ACCAACTCTT CCGGCGTGTC AGACGCCCCT
CCCATTCTGG CCGTCACCCG TCTCTTTCAG GGACTTGATG CGGACACATG GCGCGACATC
GCCGAACGCC ACCAGCTTGA AGGCTGGTTG CCTGTGGAAT TGTCGCGCGA CAGCTGCACC
AACCTGCGAG AATGGCAACG CACCATCGAG GAGATGGCAC GCCAGCGCGA CACCGACCCG
CTTACGGGCC TGCCCAACCG CAGGGCTTTC ACAAGGCACC TCGAAGCTGA ACTTGAAAGG
ACGCGCAGAG GACGTGGCGA CCTCAGTCTG GTCATTCTCG ACATCGACCA TTTCAAGTCG
GTCAACGACA ACTACGGGCA CCCCTGCGGC GACGAGGTGC TTTTACGCCT TGCCTCCCAG
TTGCAGACCT CCGTGCGCCT CTACGACCTT GCAGCGCGAA TCGGCGGCGA AGAGTTCGCC
ATCGTCCTGC CCGGCGCCTC GGCGTTGAAG GCCCAGGCCC TTTGCGAACG CATCCTGCAA
CGTTTCGCAT CCACCGGAAT GGACTGCCCG GGCGTTCCGC CCTTCCATGT CACCTTCTCC
GGCGGCATCG CCACCTGTAC CACCGGCGTG ACCTGCCCGG CGTCCCTTCT GGTGGACAGG
GCCGACAAGG CCCTCTACGA GGCCAAGCAG GCAGGGCGCA ATCGCATCTA CGTCCACCGG
GAACCCGGCA TCACACATCC TGAACGCAGC ACTCTGGTCG AATCCAGCGA AAAACAGTTT
CTGTTCTCGG GCAACACAGG GCAGACCAAG CCATGA
|
|---|
| Protein sequence | MDKRRTDPGN GHEREKLIAE LERLRAAIAA MDETVHEGGG TVVSSRPNAD TDAVSLPVQP
CVMDSPEEAM TNSSGVSDAP PILAVTRLFQ GLDADTWRDI AERHQLEGWL PVELSRDSCT
NLREWQRTIE EMARQRDTDP LTGLPNRRAF TRHLEAELER TRRGRGDLSL VILDIDHFKS
VNDNYGHPCG DEVLLRLASQ LQTSVRLYDL AARIGGEEFA IVLPGASALK AQALCERILQ
RFASTGMDCP GVPPFHVTFS GGIATCTTGV TCPASLLVDR ADKALYEAKQ AGRNRIYVHR
EPGITHPERS TLVESSEKQF LFSGNTGQTK P
|
|---|
| |