Gene Dvul_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1296 
Symbol 
ID4662902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1586093 
End bp1586971 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content62% 
IMG OID639819527 
Productdihydrodipicolinate synthase 
Protein accessionYP_966742 
Protein GI120602342 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000060181 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.083937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCA CTGGAGCCTT TACCGCCATC GTCACTCCGT TCCGCAATGG TCGCGTCGAT 
GAAGAGCGAT TTCGCGAACT CATCGAATGG CAGATAGAAC AGGGCATCAA CGGCCTTGTT
CCCTGCGGGA CTACGGGCGA ATCCGCCACT CTCAGCCATG ACGAGCATCG CGACGTCATC
CGCATCTGTG TCGAGCAGGT CAAGGGCCGC ATTCCCGTAC TGGCAGGCGC GGGTTCGAAC
AACACACGCG AGGCCATCGA CCTCACCCGC TTCGCCAAGG AAGCCGGTGC CGACGGCGCG
CTGCTCATCA CCCCCTATTA CAACAAGCCC ACACAGGAAG GACTGTACCT GCACTTCAAG
GCCATCGCCT CCGAGGTGTC GATGCCCTTC ATCGTGTACA ACGTCCCAAG CCGGACGGGC
ACGAACATCT GCCCCGAGAC TCTGGCGCGC CTCAACCGTG ACATTCCTGA AGTTGTGGGC
GTGAAAGAGG CCACGGGCAA CCTCATTCAG GTCTCCGAGA TTCTCGAATA CTGCGGAACC
GACTTCCAGG TACTCTCCGG CGACGACTTC ACCGTGCTGC CCCTGCTTTC CGTTGGCGGC
TGCGGGGTCA TCTCCGTCAC GTCCAACGTC GTTCCCGCCA AGATGTCGGA CATGTGCCGG
GCCTTCAAGG CGGGCGACCT CGCCACTGCA CGGCGGCTGC ACTTCGAGCT TTCGCCCATC
AATCGCGCCA TGTTCCTCGA AACCAACCCC ATCCCGGTCA AGACGGCCCT TGCACTCATG
GGCCGCATCG ACCTCGAGAT GAGGCTCCCC CTCTGCCCCC TGCAACAGGT CAACCAGTCG
CGTCTGCGGG ACATCCTCGC GGCAGCGGGC ATCCTGTAA
 
Protein sequence
MQFTGAFTAI VTPFRNGRVD EERFRELIEW QIEQGINGLV PCGTTGESAT LSHDEHRDVI 
RICVEQVKGR IPVLAGAGSN NTREAIDLTR FAKEAGADGA LLITPYYNKP TQEGLYLHFK
AIASEVSMPF IVYNVPSRTG TNICPETLAR LNRDIPEVVG VKEATGNLIQ VSEILEYCGT
DFQVLSGDDF TVLPLLSVGG CGVISVTSNV VPAKMSDMCR AFKAGDLATA RRLHFELSPI
NRAMFLETNP IPVKTALALM GRIDLEMRLP LCPLQQVNQS RLRDILAAAG IL