Gene Dvul_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1209 
Symbol 
ID4662731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1482160 
End bp1484253 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content63% 
IMG OID639819441 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_966656 
Protein GI120602256 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.282215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGACC GCCCGGCCGT GATGCGCCTC TTCGGGGATG AGGCACGCGA GTTGCTCATC 
GACATGGAGT CGTTGTTCCT CGAACTGGAA CAGACTCCGG ACGACAGGGC ACTGGTGGCC
CGTGTCTTCC GGACGATGCA CACGCTCAAG GGAAGCGGGG CGATGTTCGG CTATACCGAA
GCTGCGCGCG TCGCCCATGC CCTTGAGGAT GTCTTTGACA GGGTACGGCA TGGGCGGCTT
CCGCTGACAT CCGAACTGCT CGGCCTCTGC CTCGAGGCGA AGGACCATCT TCAGACCCTG
CTGGAAGGCG ACCCCGCCGA TGTGCCTGTT GCGGTGCGCG AGGCCTCGGA TGCACTCATG
CTTCGTATCG CAGCCTTTGA GCATGATGAA GCCGATGTCG ACGATGGGCA GGCCGTTCAT
GCCGCCAAGC CTCATGATAC TGGTGTTCCC GAACACATGA CCATCTCAGG TGATGCGACG
GGCGAGGACG AGGTCTGCCT CTGGGTACGC CTTACGCCAG CAGGCGACTG GATGTGGCGA
GGGCTTGACC CGTTGCGCCT GCTCGATTCG TTTCGCGGGT ACGGGCCATT CGAGGTCGTT
CCGGTGTTCG CCGACGGCGG ACTGGAACAT GTGGGCGAGG TGCCGTTCCC CGTGCGCTGG
GAGGGCGTAC TCACCGGCCG GGTCTCTGCT GACGTCTTGC GGCAAGACTA TGCGTGGCTT
CTGGATAGCG AGAACCTGTC GATCATGTCC CTTGGCAAGC GCAGTGACTG TCCTCCGGTG
CGAGCCTTGC TTTCCGCAGC CGTGGGGGGG CGCGTGAATG ACCCCTCGGC CCTGATGGCC
GCTGCCCGCG CCATGGAGAG GGAGGACATC TGCAACTGCA TGGATGTCCA GTCTGTGGCG
TCGGAGGTCG CCCAGGCTGC CGAGGCGTCA TCCTCCAGTA TCCGGGTCGA GAGTGCCAAA
CTCGACAGGC TCGTGGGCTT CGTGGGCGAA CTGGTCATCC TGCAATCGCG CCTCTCGCAG
CTTGTGCGTG GCGTTCCCGA TGATGCCATG CGTGAAGTGG CAGAGGGGCT GGAACGGTTG
GCTGGCTCGT TGCGTGACAG TGCCATGTCC ATGCGCATGG TGCCCATGGG GTCTACGTTC
CACAGCTTCA GACGGCTTGT CCGCGACCTT GCCGCGCAGC TGGGCAAGAA GGTGCTCTTC
GAGGCCGAGG GCGGAGATAC CGAACTGGAC AAGACACTCA TCGACCAGTT GCGCGACCCG
TTGCTGCATC TTCTGCGTAA CGCCATGGAC CACGGCATCG AACCTCCCGA GGTGCGGCTG
GCGACCGGAA AACCGGAAGA AGGCGTGGTG CGACTCGGGG CCTCACATTC CGGTGGAGAG
GTGCATATCT ATGTTTCCGA CGACGGTGCC GGGGTAGACC TTGAGAAGGT GCGACTCCGT
GCCGTCGCCA TGGGGCTCAT ACCGCCCGAG ACCGAACCGG ATACCGCCAC CTTGCTTGCG
CTGCTGTATG TTCCAGGCTT CACGACAGCA CCGGGCGTCT CGGAGATATC CGGTCGTGGC
GTGGGCATGG ATGTCGTCCA CAGCGCCATC GCCGCGTTGC GAGGTTCGCT GGATATGGAG
ACGACGCCGG GACGAGGCAC CACATGCCAT ATCAGGCTTC CGCTGACGCT AGCCATCATC
GACGGCATGC GCGTCCTTGT GGGCGGTGAT TCGTACATCG TGCCCCTGAC CATGGTCGAA
GCCTGCCTCG AACGCTTCGT GGACGGGGCC GTCCGTACCG TGGAGTGCAT CGAATACCGC
GGTCGCCTGA TTCCGTGCGT CAGCCTGCGG CTTCTTCTCG GTGTGCCGGG CGAACAACCC
GGTTACGAAC GTGTCATCGT CGCGGGTAAG GAAGGACATG AAGTCGGTTT CGCCGTGGAT
GCCGTGGTCG GGCTGCAACA GGCGGTCATC AAGGGTGTGG GGAATCTGTG CCGCAACGTC
GCATGGATTT CAGGGACGAC GGTCGATGCC GATGGCGGCA TCTCGCTCAT TCTCGATGTG
GTGCAGTTGA TACGTTTCGC GGTCGGCAGC GTCGGTCCCG AAGCCCATGC CTGA
 
Protein sequence
MIDRPAVMRL FGDEARELLI DMESLFLELE QTPDDRALVA RVFRTMHTLK GSGAMFGYTE 
AARVAHALED VFDRVRHGRL PLTSELLGLC LEAKDHLQTL LEGDPADVPV AVREASDALM
LRIAAFEHDE ADVDDGQAVH AAKPHDTGVP EHMTISGDAT GEDEVCLWVR LTPAGDWMWR
GLDPLRLLDS FRGYGPFEVV PVFADGGLEH VGEVPFPVRW EGVLTGRVSA DVLRQDYAWL
LDSENLSIMS LGKRSDCPPV RALLSAAVGG RVNDPSALMA AARAMEREDI CNCMDVQSVA
SEVAQAAEAS SSSIRVESAK LDRLVGFVGE LVILQSRLSQ LVRGVPDDAM REVAEGLERL
AGSLRDSAMS MRMVPMGSTF HSFRRLVRDL AAQLGKKVLF EAEGGDTELD KTLIDQLRDP
LLHLLRNAMD HGIEPPEVRL ATGKPEEGVV RLGASHSGGE VHIYVSDDGA GVDLEKVRLR
AVAMGLIPPE TEPDTATLLA LLYVPGFTTA PGVSEISGRG VGMDVVHSAI AALRGSLDME
TTPGRGTTCH IRLPLTLAII DGMRVLVGGD SYIVPLTMVE ACLERFVDGA VRTVECIEYR
GRLIPCVSLR LLLGVPGEQP GYERVIVAGK EGHEVGFAVD AVVGLQQAVI KGVGNLCRNV
AWISGTTVDA DGGISLILDV VQLIRFAVGS VGPEAHA