| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1045 |
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| Symbol | |
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| ID | 4664399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1280720 |
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| End bp | 1282762 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639819270 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_966492 |
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| Protein GI | 120602092 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAACA TTCCGCAGCA TCAGTCCCGG GCGGCATGGC TCCGAGCCGA ATTGGCACGG
CACAACCGCC TCTACTACGA GCTCGATACG CCCGAGATAA GCGACGCCGA ATACGACACC
CTCTATCGTG AACTCGTCAA CCTTGAAACG CTCTGGCCCG CATTGATGGA CGAGGCATCG
CCCACGCAGA GAGTCGGCGG CGAAGTCCTC GATAGGCTTG AGAAGCAGGC GCACACCATG
CGTATGTACA GCTTGGACAA CGCCTTCTCC CGCGACGAGT GGGGGGCGTT CATTCAACGC
ATGTACAATA CCCTGCCCGA AACCCCTTCG TCCTTCTGGT GCGACCCCAA GATGGACGGT
CTCGCACTGG AGGTCATCTA CGAGAATGGC GTCTTCACGT CGGCGTTGAC GCGGGGCAAC
GGCGCAGAGG GTGAGGTCGT CACCGCTGCC ATGAGGACGG TGCGCAACCT GCCTCTTCGC
CTACGAGGAA ACAATGTGCC GCACCGCCTT GAGGTTCGCG GCGAGGTGGT CATCGCCAAG
GCCGATTTCG AGCAACTCAA CGCGCGGCAA TCCGCAGTCG GTGGCAAGGT TTTCGCCAAC
CCGCGCAATG CTGCCGCGGG GTCAGTGCGG CAGCTCGACA CGTCTATCAC CGCTGGAAGA
CCTTTGCAGT TTCTCGCCTA CGGGGTGGGA CAGGTGGTTC TCGATGGTGG CACCGCGCCG
TGGACGACCC ATAGCGACCT CATGGCGCGG CTTCGTGAAT GGGGGTTTGA CTCGCCCCCG
GAAGGTCGTC TGTGCACATC GCCGGACGAG GTGTGGGCCT ACTACGAGAT GCTCGGCGCA
CGCCGCGAGT CGCTTGCCAT CGAAATAGAC GGCGTTGTCG CAAAGGTTGA TGACACCGAG
GCGCAAGAAG CCCTTGGCTT CACGGCGCGT GCTCCACGGT GGGCACTGGC CCTCAAGTTT
CCTGCAATGC AAGTGCGCAC TCGTCTACAG GACATTCGCG TGCAAGTGGG ACGAACTGGG
GTGCTCACAC CTGTAGCGAT ACTTGAGCCT GTGCGCGTTG GTGGGGTCGA GGTGTCACGA
GCCACGCTCC ATAACGCCTA TGAGATCGAA GACAAGGGCC TGATGCTTGG CGACATGGTG
CTGGTGCAGA GGGCTGGCGA CGTCATCCCC GAAGTCGTGC GCCCCTTAGT CGAAGATCGC
ACGGGTGGCG AACGCCCCTT CGTTTTCCCG ACAACCTGCC CTGAATGCGG AAGCGTCGTA
CACAAACCCA ACGACGAAGT TGCACACCGA TGCATTAACG TCTCGTGTCC TGCTGTGCGC
AGACAATCCA TCATCCATTT CGTTTCCAAG GCAGGCCTCG ATGTGCGCGG CTTCGGCGAG
CACATCGTGC AGCAACTAGT CGATGCTGGC CGCGTGACGA CGGCTGCGGA TCTGTTCTCG
CTTACAACGG TCGACCTGAT GGGTTTTGAA CGCATGGGGC CGACATCAGC TGCAAACGCA
ATCGCATCTC TTGACGCTGC ACGCACAGGG GCAACGCTTG CCAGGCTCAT CTGCGCACTA
GGCATCCGTC ATGTCGGCGA GCAGACGGCG CGGACTCTTG CCACGCACTT CGTAGATCTT
GATGCCATGC GAAAGGCCGA CGGCGAAAAA TTGCTGCACC TGCCTGACAT TGGCCCAGAG
GTTGCCGCAT CCATTCGCTG TTTCTTTGAC AACCAGAGCA ACATCGAGCT GCTTGAACAA
CTACGCGACA AGGGGCTGTG GCCTCGGAAG CCCGATGCCA ATGGACCATT CGTCCGCGAG
GGTAGCCAAC TCCAAGGGCT GAAGCTGCTT TTCACAGGGA GTTTGCAACG CATGAGCCGC
AGCGAGGCCA AACGCATGGC TGAAGCTGCA GGGGCGCATG TTGTCTCCAA TGTATCAAAG
TCCCTCGACA TGATTGTGGC TGGTGCCGAC GCTGGCTCCA AGCTGGATCA GGCCAAATCC
CTCGGCCTAC ACGTCATTGA TGAAGACGCA TTCGCCAACC TGCTGAAAGG GCTAGACCGC
TGA
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| Protein sequence | MCNIPQHQSR AAWLRAELAR HNRLYYELDT PEISDAEYDT LYRELVNLET LWPALMDEAS
PTQRVGGEVL DRLEKQAHTM RMYSLDNAFS RDEWGAFIQR MYNTLPETPS SFWCDPKMDG
LALEVIYENG VFTSALTRGN GAEGEVVTAA MRTVRNLPLR LRGNNVPHRL EVRGEVVIAK
ADFEQLNARQ SAVGGKVFAN PRNAAAGSVR QLDTSITAGR PLQFLAYGVG QVVLDGGTAP
WTTHSDLMAR LREWGFDSPP EGRLCTSPDE VWAYYEMLGA RRESLAIEID GVVAKVDDTE
AQEALGFTAR APRWALALKF PAMQVRTRLQ DIRVQVGRTG VLTPVAILEP VRVGGVEVSR
ATLHNAYEIE DKGLMLGDMV LVQRAGDVIP EVVRPLVEDR TGGERPFVFP TTCPECGSVV
HKPNDEVAHR CINVSCPAVR RQSIIHFVSK AGLDVRGFGE HIVQQLVDAG RVTTAADLFS
LTTVDLMGFE RMGPTSAANA IASLDAARTG ATLARLICAL GIRHVGEQTA RTLATHFVDL
DAMRKADGEK LLHLPDIGPE VAASIRCFFD NQSNIELLEQ LRDKGLWPRK PDANGPFVRE
GSQLQGLKLL FTGSLQRMSR SEAKRMAEAA GAHVVSNVSK SLDMIVAGAD AGSKLDQAKS
LGLHVIDEDA FANLLKGLDR
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