Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0908 |
Symbol | |
ID | 4663143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1117437 |
End bp | 1119161 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639819131 |
Product | glycosyl transferase family protein |
Protein accession | YP_966356 |
Protein GI | 120601956 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0214685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTTCAT CGCCCTCTTC CGCCTCCATC GCCGCGCTGG TCGACCTGTG CTGCACGCAC GTTCCCCTGT GGGAATGCGG CGCACTGGGG GCGGACAACG CATGGCGGCT TGCCTCGACG GCACTTCAGA CCGGCGACGC TGCCCTTTGC GGGGTGGGTG CGCAGCTGGC ACGTTTCGCA TGGGAGGCCG ACCCTCTCGA CCCGCGCCTG TCACGGCTTG TGGCTGCGCT GGAAGAGGAC GGACTGCTTG CCGCCCCTGC CGCTTCGCTG GCGCAGGACA TCGCCCGCCG CTGCCGCGTG CCCGGCGACC ACGCCCTCCT GCATTCCGTC ACGGACGGCA ACGCGCTACG CGACATCGTG CTGCCGCGTC TTGCCGACCC CGCACACGGC GCCTTCTGGC TTGGGCGCGG CGTGGCTTGG TGCATGTCGC CTCAGGCGGA GGATGCCGCA GCGACCCTCG ACATGCTGCT GACGGCCTTT CCCGATTGCC ACCCTGCGCT GTCGCACCGT CTGCGTACCG CCTACGCCGT CCTGCACGGA ACACACGGCG AAGCCCACAC ACTGCTGGAG ACCCTCGCCC CGTCAGGCCG TGATGGTGTC GCCGTCGCAA ACGGTGCCGA ATACGGCGGT CACGACGCCA CGCGACACGG TACGTATACG CCGTTCATGA ACTGGGCCAC CGTTCGCCGC GCTGCCCTCC TCGCCGAAGA AGGCGACACC GCCGAAGCCT CTGCCCTGCT TCGCCGTGTG TGGACGGCCA TGCCGTGGCA CCCCAACCTC ATTCTGGCAC TGCACGAACT TGAACGGCCC CACCCGGCCC CGCCCAAGGA CACGCCGCCT CCAGCCATCC TGCTCTATTC GTGGAACAAG CGTGATGTCC TCGCCGCCAC ACTGGATTCG TTGCGCGCAT CGGGAACGGG CGACGCCCCG GTCTTCGTGC TCGACAACGG TTCCACCGAC GGTACGGACG CCATGCTTGA CGCCATCGCC CGGCAGTGGG GCAGCCCGTT CACCAAGCTG CGCCTGCCCG TGAACATCGG CGCGCCTGCC GCGCGCAACT GGCTGCTCTC GCTCGATGCG CTCAAACGCC ACGATCGTGT GGTCTTCCTC GACGACGACG TGCTGCTCGA CCACGGCTGG CTCGACGGGC TGCTCTCCAT CGCCGTGGCG CACCCTTCCG CCGCCGTCGT GGGGTGCCGC ATCACCGACG CCACAGCACC CCACGCCGTG CAGTGCGCCG ACTTCTTCGC CCTTCCGCCC GCATTGGGGC AACGCAGCTT CGCAGACCTC GAAGAGCATC TTTTCATCCA CGGCAACGCG GGCGCGAGCA CAGACACCCT GCTCACCGCC TACAGTCGCC CGTGCCTGTC CGTCTCCGGC TGCTGCCATC TTTTCGACCG TGCCGCCCTC GACGCGTGCG GACACTTCGA CATACGCTTC TCGCCAAGCC AGTTCGACGA CCTCGAACAT GACCTGCGTA CCGTCCTCTC CGGACGCGAA GTGTGGTATG CAGGCGGCGT GCGGGTGCGT CATGTCCAGC ATTCGAGCCT GCGTCAGGCG GCGGACAGGG CGCGTAGCGC GCATATTTTC GGCAACAGGA TCAAACTCGA ACACCTCTAC CCCGCACAGC GTGCAGCCGA GGCCCGCGAG ACTTCGGCAC TGGCCGCGCG CCGGGACCTG CTGCGCAAGG CCAGCCGCCT TGCCGGCACT GGAAGCCGAC CATGA
|
Protein sequence | MSSSPSSASI AALVDLCCTH VPLWECGALG ADNAWRLAST ALQTGDAALC GVGAQLARFA WEADPLDPRL SRLVAALEED GLLAAPAASL AQDIARRCRV PGDHALLHSV TDGNALRDIV LPRLADPAHG AFWLGRGVAW CMSPQAEDAA ATLDMLLTAF PDCHPALSHR LRTAYAVLHG THGEAHTLLE TLAPSGRDGV AVANGAEYGG HDATRHGTYT PFMNWATVRR AALLAEEGDT AEASALLRRV WTAMPWHPNL ILALHELERP HPAPPKDTPP PAILLYSWNK RDVLAATLDS LRASGTGDAP VFVLDNGSTD GTDAMLDAIA RQWGSPFTKL RLPVNIGAPA ARNWLLSLDA LKRHDRVVFL DDDVLLDHGW LDGLLSIAVA HPSAAVVGCR ITDATAPHAV QCADFFALPP ALGQRSFADL EEHLFIHGNA GASTDTLLTA YSRPCLSVSG CCHLFDRAAL DACGHFDIRF SPSQFDDLEH DLRTVLSGRE VWYAGGVRVR HVQHSSLRQA ADRARSAHIF GNRIKLEHLY PAQRAAEARE TSALAARRDL LRKASRLAGT GSRP
|
| |