| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0676 |
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| Symbol | |
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| ID | 4663777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 838965 |
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| End bp | 840617 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639818893 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_966126 |
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| Protein GI | 120601726 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0260909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT TCGACACGTT GCAGGGCAGG CTCGTCTTGT TTGTACTGCT GCTGTTCGGT
GCACCGTTGC TGGTAGCCCC TCTCGTGTTT CTGTTGTTCT TGCGACAGCC GTTCGTTGCG
GATGTGTCGG CCGACCTGAA TGCCGAATTG GCCCACCATG CCCGTGTCCT TGATGGATTG
CTGGACGGGT ATGCGGGAAG GGTGCAGGTG CTTGCGGCGA CCATCATGCT GCATGATGAC
TCACTCTTGA GCCTTGAGGA CCATTTTCGC GTCGTTCAGA GTGCAACACC TGATTTCGAT
GATATTTTCG CTGTTGGCCC GGATGGGACG GTGGTGGCGG GCATCAAGGC GAAACCGGGG
CTTGCCCTCG GAGACCGAAG CTACATACGT AGCGCCCTCG ATGGGCGTCG CGTCGTTTCC
GAGGTCGTGA AGTCGCGGGT CAGTGGCAAG CCCATCGTGG TAATCGCCGC CCCCTATCGG
GACAGGGCGG GTGCTATCGC TGGTGCCGTG GGGGGCGTGG TCGACCTCAC GCGGGTCAAC
ATGGTGCTGC AGAGTCTTCG CCTGCGCGAT GGTGGAACGG CATTTCTGGT TGGACGCGAC
GGCATCACGC TGACAAAGGG CCGGACACTC GGCACCGACG AAGTTGCCTC GTTACGCGCA
CTTGCCGGGG ATGACGGGCG TCGTTTCATG GTCATGCAAA CAGCGGAAGG CATTGACGTG
CTGCGTGTGG CGCGGTTTGC CAAGGGGGGA GAGTGGCTTC TCGTGCGCGA GTTGCCGCAG
GACGTGGCAC TTGCGGGACA GCGGCGTGCG GCTTTGGTCG TTCTGCTGGT GAACAGTGCC
ATCGTACTCG TCCTTGTACC GTTCGTGGTG CGCTTCGGAC GAACCATCGT CCGGCCTACG
CGGCTGGTGG CTACACTTTC AGGAAGGATT GCGGCCGGAG ATTTCCAGCC GGAATGCGAG
TTTGTCGACC TTGCTGCCGC ACCTGTCGAG ATACGACAGT TGTACAAGAA CTTCTGTACC
ATGTCGGCCC GACTCGGCGA ACACATGCGG GCGCTGGAAC GCATGGCAGT TACCGACCAG
CTTACCGGGT TGCACAACCG TCGGTATGTC GCCGTTGAAG GTGCCAAGGT GGTGGATGTG
TGCTGGCGTG GCGGTCGACC GTGCAGCTGC CTGATGGCTG ACATCGACCG GTTCAAGACC
ATCAACGACA CCTATGGACA CGAAGCCGGA GACGCCGTGT TGCAGGCTTT TGCAGAGGTG
TTCCGCGGAG GGCTCAGATG GTCGGACATA GGGGCGCGCC ACGGCGGCGA GGAGTTCGTG
GTCATAGCCC CCAATGCCGA TACCCGCGAC GCCGTGGTGA TTGCCGAACG GTTGCGTGTG
GATGCCGCTG CGCTTGTGGT GGAGTTCGGT GGACACGTCA TTCGTTTCAC GGTGAGTGTC
GGGGTAGCCT CGCTGGATGA ACACGGCGGA GACGGGAATC TGCTGGAAGA GCTTCTTCGC
AGGGCGGACA CAGCGCTGTA CCGGGCCAAG GCCGAAGGGC GTGACAGGGT GTGCGTGTGG
CGTGAAGGCG ATGGCGACGG ACCCTGCCTG CCCGGGAAGG CTCCTGATGG GGCTTCTTCT
GCTGACGGCG ATGGCGGTCG GGGCGAGGCC TAG
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| Protein sequence | MKRFDTLQGR LVLFVLLLFG APLLVAPLVF LLFLRQPFVA DVSADLNAEL AHHARVLDGL
LDGYAGRVQV LAATIMLHDD SLLSLEDHFR VVQSATPDFD DIFAVGPDGT VVAGIKAKPG
LALGDRSYIR SALDGRRVVS EVVKSRVSGK PIVVIAAPYR DRAGAIAGAV GGVVDLTRVN
MVLQSLRLRD GGTAFLVGRD GITLTKGRTL GTDEVASLRA LAGDDGRRFM VMQTAEGIDV
LRVARFAKGG EWLLVRELPQ DVALAGQRRA ALVVLLVNSA IVLVLVPFVV RFGRTIVRPT
RLVATLSGRI AAGDFQPECE FVDLAAAPVE IRQLYKNFCT MSARLGEHMR ALERMAVTDQ
LTGLHNRRYV AVEGAKVVDV CWRGGRPCSC LMADIDRFKT INDTYGHEAG DAVLQAFAEV
FRGGLRWSDI GARHGGEEFV VIAPNADTRD AVVIAERLRV DAAALVVEFG GHVIRFTVSV
GVASLDEHGG DGNLLEELLR RADTALYRAK AEGRDRVCVW REGDGDGPCL PGKAPDGASS
ADGDGGRGEA
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