Gene Dvul_0635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0635 
Symbol 
ID4664972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp788844 
End bp789692 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content60% 
IMG OID639818846 
Productextracellular solute-binding protein 
Protein accessionYP_966085 
Protein GI120601685 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA GAATACGCGT ACCACGGTGG GTTTCGGTGC TCGCGCTGGC AGTCGGCGGC 
ATGAGCCTGC TTTTCGTGAC TTCAGCACTG CTTCCCCTGC TCCATACAGA CCAGTCCGAA
TCATGGCGCG ACACCATCCG TATCGGGTAT GCCATTGAGC CTCCCTATGC CTTCGTGAAC
AAGAATGGCA ACGTGACAGG CGAATCTCCC GAACTGGCGC GCATCGTGGC CCGCAGAGCG
GGTATCCGCT CTACCCGCTT CGTCCTGTGC GATTTCAACA GGCTCATCGA TGCGCTCGTC
GCAGGCGAAA TAGACGTTAT CGCCTCCGGC ATGTTCATCA CCCCGAAGCG CATAAAGCGC
ATCGCCTTCT CACAGCCCAC CACCACGGTT CACCCAGGGC TTCTGGTACA GCGCGGCAAC
CCGCACAAGA TAGACGGCTA CGGGGCATTC ACAGCAGGTT CGGGGGTGAG GGTGGCGGTA
CTGAACGGCT CCGTCGAACA GGGCTATCTG CTGGCATCCG GGGCCTCATC TTCCGCCATG
GTCATCGTAC AGACACCTCA AGAGGCGCTC ACCGCGCTAC ACGACAACGC CATACAGGCA
ATCGCCCTCT CTGCGCCGAC CGTGAGCTTC ATGGTCGCGT CATCTCCATC CGAGTTCGAA
GCCATTGCGG GTTTCACCCC CGGAGAGGCC CCACCCGAGG AGCACTGCGC GTTCGGGTTC
CGCCTCGATG ACACATCATT GAGGCAGGCC TTCGATGCAG CACTTGCCGG GTATCTGGGG
ACGCAAGAGC ACATCGAAAT GATATCACGT TTCGGATTCG ACAGATCAGC CGTACCCCAG
ACGCGATAA
 
Protein sequence
MPARIRVPRW VSVLALAVGG MSLLFVTSAL LPLLHTDQSE SWRDTIRIGY AIEPPYAFVN 
KNGNVTGESP ELARIVARRA GIRSTRFVLC DFNRLIDALV AGEIDVIASG MFITPKRIKR
IAFSQPTTTV HPGLLVQRGN PHKIDGYGAF TAGSGVRVAV LNGSVEQGYL LASGASSSAM
VIVQTPQEAL TALHDNAIQA IALSAPTVSF MVASSPSEFE AIAGFTPGEA PPEEHCAFGF
RLDDTSLRQA FDAALAGYLG TQEHIEMISR FGFDRSAVPQ TR