Gene Dvul_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0478 
Symbol 
ID4662316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp605990 
End bp606958 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID639818687 
Producthypothetical protein 
Protein accessionYP_965928 
Protein GI120601528 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0154508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAGAG ATACCGTACT GACAGCGACC CCGACCATCG ACGCAGACCT CGCGGAAGCG 
ACGTCTTGCG CGACGCCCTC CCGCGCGGAG GTTTCGCCAC TGTTGCCCGT ACTCGCGGCA
CTCGCCGCCG TCGTCCTCTG GGGGGGAGCC TTCCCTGCCA TGAAGGTCGC GGTGCAGACC
CTCGGCACAT GGCAGATGAT GTGGGCACGC ATGGTGTTCG CCCTGCTGCT GCTTGTGCCG
CTGGCACGAC GCCTCGCCCC CGCGCGCATC GAACGGCGCG ACCTGCCGCT GCTGGCGGGC
ATGGCCCTGA TGCAGCCCTG CCTCTACTTC CTGTGCGAAT CGACGGCGCT GCAACTCACC
ACCTCGTCGC AGGCGGGCGT CATGGCCGCG TCCATGCCGC TGATGATGGC CGTGGGAGGC
TTCCTCCTTG GCGAGAAGGT CAGCCCCCGG CTATGGTTCG GCGTGGGGGT GTCGTGCATC
GGCGTGGCAT GGCTCACATC ATCCGGTGGT GAAGGCGGAG GCACAGCGCC GGACCCGTTC
ACGGGCAACC TGCTTGAACT CGCGGCCATG GCTTGCGCCA CAGGCTCATC GCTGTGCATC
GGTGCGCTCA TCTCACGCGG CAAGGGAAGG TGGAACGCCC TCACACTCAC CGGCATCCAG
ACGCTGGCGG GGGCCGTCTT CTTCCTGCCG GGGGCACCCG GCGTCATCGG CGGCGTCGCG
GACTGGTCGA CGGAGGTCCT GCTTGCCGTC GTCTACCTCG GCGGGGCCTC ATCGCTGGGG
GCCTTCGGCC TCTACAACTG GGCACTGGGA CACATGCCCG CCAGCCGTGC GGGCAACTTC
ATCAACCTCG TGCCCGTGGC CGCCATCTTC TTCGGCTGGC TTCTGCTGGG CGAGACGCTG
ACGACGACGC AGTACCTCGC CACCAGCCTT GTCATGGGTG GTGTTCTCAT GGGCACCCGC
GCCCGGTGA
 
Protein sequence
MERDTVLTAT PTIDADLAEA TSCATPSRAE VSPLLPVLAA LAAVVLWGGA FPAMKVAVQT 
LGTWQMMWAR MVFALLLLVP LARRLAPARI ERRDLPLLAG MALMQPCLYF LCESTALQLT
TSSQAGVMAA SMPLMMAVGG FLLGEKVSPR LWFGVGVSCI GVAWLTSSGG EGGGTAPDPF
TGNLLELAAM ACATGSSLCI GALISRGKGR WNALTLTGIQ TLAGAVFFLP GAPGVIGGVA
DWSTEVLLAV VYLGGASSLG AFGLYNWALG HMPASRAGNF INLVPVAAIF FGWLLLGETL
TTTQYLATSL VMGGVLMGTR AR