| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0383 |
|---|
| Symbol | |
|---|
| ID | 4664047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 495280 |
|---|
| End bp | 496425 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639818585 |
|---|
| Product | sigma-54 dependent trancsriptional regulator |
|---|
| Protein accession | YP_965833 |
|---|
| Protein GI | 120601433 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGCG ATGCCCTCAT CCCCACTCAT CCCGGACTTG CCGAAGCACT CGGCCAGTCC
GAGGCCTTTC TCGCCTTTCA GGAGGAGCTT TCGCGCGTGG CCAAGGTGGA CAGGCCAGTG
CTGCTTGTGG GCGAGCGCGG CACAGGCAAG GAACTGGCCG CCGCACGCCT GCACTTTCTC
TCACGCCGCT GGCAGGGGCC TTTCGTCATT CTCGATGGCG CATCCCTCTC GCCTTCACTC
GCCGAGGCCG AACTCTTCGG GCATGAGGCA GGCGCCTTCA CGGGGGCAGC CATGCGCCGC
CCTGGGCGGT TCGAGAGGGC CGACGGGGGC ACGCTCTTCC TCGACGAGGC GGGCAACCTG
CCTCTCAGCG TACAGGACAA GTTGCTACGG GTGGTGGAGT ACGGGCAATA CGAGCGGGTG
GGGGGGACAC AACGGCTGGA GGCTGACGTG CGCATCGTCG CCGCCACCAA CGCCGACCTG
CCGGGGCTTG TCCGGCAGGG CCGCTTCAGG GCCGACCTGC TCGACCGCCT CGCCTTCTGC
GTGCTGCACC TGCCGCCGCT ACGCGCACGC GGCGATGACG TGCTGCTGCT GGCCGAGCAT
TTCGCGACAC GCTTCGCCAT GGAGGCGGGA CTCCCTGAAC CGGAGTTCTC GACCCAGGCC
CGACGCGCCC TTCTGACCTA TGCGTGGCCC GGCAACATCC GGGAACTTCG CAACACCATC
GAACGCTGTG TCCTCAAGGC CGAAGGCGGC ATCATCACGG CACTGGACAC CACACCTTTC
GCCTCGCCGT GGCAGCACGG GCCGGCAGTC CACGCAGATG CCACGGCGGT CTCCACGCCA
GCCGGAGGCG GGGCCACCCC GGGCCCCGCC TCTGCGCCGG ATATCGACCC GGCGGACACA
GCCATGCAGC ATGGTGATTC CGGCACCGCG ACGACAACGC CCACCGCCTC ATCTCCCAAC
CCGCAGGCAT GGACACAGGG AACCACGCTG CCCGACGCCG TGCGACACCT CGAGGAGGAT
GCCCTTCGCG GGGCCCTCGC CCGCACCCGG CACAACCGCC GCGCCGCCGC GGAATTGCTC
GGACTGACCT ACGATCAGTT TCGCGGGTTG TACCGCCGCC ACAGGGACGC TATAGAGAAG
ACCTGA
|
|---|
| Protein sequence | MRSDALIPTH PGLAEALGQS EAFLAFQEEL SRVAKVDRPV LLVGERGTGK ELAAARLHFL
SRRWQGPFVI LDGASLSPSL AEAELFGHEA GAFTGAAMRR PGRFERADGG TLFLDEAGNL
PLSVQDKLLR VVEYGQYERV GGTQRLEADV RIVAATNADL PGLVRQGRFR ADLLDRLAFC
VLHLPPLRAR GDDVLLLAEH FATRFAMEAG LPEPEFSTQA RRALLTYAWP GNIRELRNTI
ERCVLKAEGG IITALDTTPF ASPWQHGPAV HADATAVSTP AGGGATPGPA SAPDIDPADT
AMQHGDSGTA TTTPTASSPN PQAWTQGTTL PDAVRHLEED ALRGALARTR HNRRAAAELL
GLTYDQFRGL YRRHRDAIEK T
|
|---|
| |