Gene Dvul_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0378 
Symbol 
ID4664096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp486685 
End bp487713 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content66% 
IMG OID639818580 
Productglycosyl transferase family protein 
Protein accessionYP_965828 
Protein GI120601428 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.799613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGC ACGCCACCCC TGCGCCAAGA GTCTCAGCCA TCGTCTCGCT GTACAATGCC 
GAACGGTTCG TGCGCGGCTG CCTCGACGAC CTGCTGGGGC AGACACTTGC GGATTCGCTT
GAAATCATCG TCATCGACGC CTGTTCACCG CAGGGCGAAG GTGCCATCGT GCAGGACTAC
AGGCGCGACC ACCCGAACAT CGTGTACGTT CGCACCGATG AACGCGAAGG CGTCTACGCC
AGCTGGAATC GAGGGGTGCG CCTTGCCCGC GCCCCGTACG TGACCAACGC CAACGCCGAC
GACAGGCACC GAGAGGATGC GCTTGAACGC CTTGCCGCAG CCCTCGACGA GGCCCCCGAA
GCGGGCTTCG CCTATGGCGA CTGCCGCGTG GGACAGACAG AGAACGAACG CTACGCCGAC
AACGCCGGGC AGCGTGTCAT GCGCTTTCCC GACTTCTTCG CGCCCGCCAC GCTTCTCTAC
TGCCAGTTGG GACCGCAACC GCTATGGCGC AGAAGAGTGC ACGACGTCAT CGGCTTCTTC
GATGAAAGCT ACCGCGCCTG TGCCGACTGG GATTTCGACA TCCGCCTCGC TGCCGCCTTC
CGGGGCATCC ACGTGCCCGA GGCGCTGGGG CTGTACCTCG AACATGAGGC CGCCATCACC
TTTCGCGACG ACACCATGAC GCGTGAGAAC GACAGGGTGC AACGCCAGTG GCAGCACCCC
GAAGCCGTGG AAGAACGCTA CCGCGCTGCG GGCGTGCCCT GCCAGACAAC GGAGGAACGC
GCCCTCGTCC ACTTCGACAT GGCGTTGCGG GCACTGCGCT TCTACCCGCC GTGGTGCTAC
GGTGCACCGG CGCACAATCC CGGCTTCGCA CGGCGTTGCC TGCGCCACGC CCTGCGCCTT
GCGCCCGCCC TCGCCCCTGC CAAGGAACTT CTCGCCCTGT CAGACGCCGT CCTCACCGCG
CTTGACGACC TGCCTTCACC GCTGGGGCTG CCCTCGCAGG CGACCCTTGC CGGGGTTGCG
GCGTCATGA
 
Protein sequence
MNPHATPAPR VSAIVSLYNA ERFVRGCLDD LLGQTLADSL EIIVIDACSP QGEGAIVQDY 
RRDHPNIVYV RTDEREGVYA SWNRGVRLAR APYVTNANAD DRHREDALER LAAALDEAPE
AGFAYGDCRV GQTENERYAD NAGQRVMRFP DFFAPATLLY CQLGPQPLWR RRVHDVIGFF
DESYRACADW DFDIRLAAAF RGIHVPEALG LYLEHEAAIT FRDDTMTREN DRVQRQWQHP
EAVEERYRAA GVPCQTTEER ALVHFDMALR ALRFYPPWCY GAPAHNPGFA RRCLRHALRL
APALAPAKEL LALSDAVLTA LDDLPSPLGL PSQATLAGVA AS