Gene Dvul_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0329 
Symbol 
ID4662258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp418337 
End bp419284 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID639818530 
Productaminotransferase, class IV 
Protein accessionYP_965779 
Protein GI120601379 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.13706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCG TTCTCGACCG TACCGCCTAC CTCGAACGCC TTCTCTCCGT CGACCGCCCG 
GGTTCGGGCA GCATTCTCGC CTTCTACGAG CACCGGGTAG GGGCCATCTG CCATGACCCG
AAGCTGATGC TCATGCCCCT CGACGACCAC CTCGCCCACC GGGGCGACGG CATCTTCGAG
AGCATGAAGT ACGAACACGG GCGCATCTAC CAGCTTGAGG CGCACCTTGA GCGCATGGCC
CGTTCCGCCG AGGGGCTGTA TCTGGAACCA CCCTGCACAT GGGATGCCCT CCGTGAGGTC
GTCATCGACG TGGCACGGGC CTCGGGGCGC GAATGTGGCA TGTTGCGGGT TCTGGTGGGG
CGCGGGCCGG GCGGCTTCGG CATCGACCCT GCCGAGTGTC CCGAAGCCAG CCTGTATGTG
GCGGCCTACA AGTTCACCCC CAAGGACGAG GCATGGTACG CCAAGGGGCT CACTGCCTTC
CGTAGCGCCA TTCCGGCCAA GCAGGGGTAT CTGGCCCGCA TCAAGAACGC CAACTATCTG
CCCAACGTGT TCATGACCCG CGAGGCGCAT CAGCGCGGCA TGGATGTGGC GTTCAGCTTC
GACGAGGAGG GGTTCCTCGC CGAGGCCGCC ATCGCCAACG TGGCGCTGGT CGACGCGCAG
GGCACGCTGG TGGTGCCGGA GTTCAGCAAC GCGCTCGCTG GTACGACGGT CCTGCGGGCC
ATGGAACTGG CACAGGGCGA GATGCCCGTG GCGTTTCGCA AGGTGCGCGA AGACGACCTG
TACGCTGCAC GTGAGGTGCT GGTGCTTGGA ACCAGCAGCG ATTGCGTGGG TGTGGTGGCG
TTCGAAGGGC GACCGGTGGG CGACGGCAGA CCCGGCCCGG TTTCGGCCCG GTTGCGAGCG
CTGTTGCAGG CCGACCTTCT GGCCAGCGGC ACACCGTTCC TCGGCTGA
 
Protein sequence
MPPVLDRTAY LERLLSVDRP GSGSILAFYE HRVGAICHDP KLMLMPLDDH LAHRGDGIFE 
SMKYEHGRIY QLEAHLERMA RSAEGLYLEP PCTWDALREV VIDVARASGR ECGMLRVLVG
RGPGGFGIDP AECPEASLYV AAYKFTPKDE AWYAKGLTAF RSAIPAKQGY LARIKNANYL
PNVFMTREAH QRGMDVAFSF DEEGFLAEAA IANVALVDAQ GTLVVPEFSN ALAGTTVLRA
MELAQGEMPV AFRKVREDDL YAAREVLVLG TSSDCVGVVA FEGRPVGDGR PGPVSARLRA
LLQADLLASG TPFLG