| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0280 |
|---|
| Symbol | |
|---|
| ID | 4664034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 350376 |
|---|
| End bp | 351401 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639818481 |
|---|
| Product | TonB domain-containing protein |
|---|
| Protein accession | YP_965730 |
|---|
| Protein GI | 120601330 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.256703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000121849 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAA CCAGCTTTCT GCTTTCGCTC GGCCTGCACT GTTCCGTGCT GTTGCTGGTG
ATATTCTGGC CCGATTCGGC GCCGATACGC CTCGACCAGC CGGTCTACCA GGTGAGCCTC
GTCAGCCTCG GCGACCCGGG CGGCAATCGC GTACCCAACG CGTTGCCGGG GCCTGCCGGA
CCGCCGGCGC AGGCCAAGGC CGAACCGAAA CCCACTCCGG GGCCGGAAAA GCCCGATGCC
CCGGCCATCG CCGCCCCCAA GGCGGAGAAG AAACCGGAAC CCAAGCCCGA GCCGAAGCCC
GAACCCAAGC CTCAGCCCAA ACCGGAACCC AAGCCCGAGC CCAAGGTCGA ACCGAAGCCC
GAACCCAAGG CCCAGCCGAA GCCAGAACCG GACGCCAAGG CCATCAGCGA GAAGAAGAAG
GACGAGCCCA AGAAGCCCGA ACCCGAGACC TCGAAGGATG CCAAGGATAC GAAGAAGGCC
GTAGCGGGCA AGGACGACGC CAAGGACAAG GCCAAGACTG AAGGCAAACC AGCGCCCAGC
AAGGATGACA TACTCAAGCA GGCGCTCGCC GACGCGCAGG GTAAGGCCGG AAGCACCGGA
ACGGCCCAGA AGTCATCAGG AACAGGCGGC AAGACCGCCG GTGGTTCCGT GAACAACGCC
CTTGCCGAGA TGCAGAAGAT GGCCGCCGCT GGCGGCGGTG GCGGCGGCGG TGGCGAAGGT
CACGGTTCTG GAGGCGGCGG CGTGGGCGAT GTGTATATCG GTCAGGTCAT GGCCATCGTA
CGGCAGAACT GGGAATTTCC GCAGCTCGCA AGCCGTCAGG ACCTTCAGGT GCGCGTGCGC
GTAACAGTGG ACGCTTCCGG GCGTATCGCC GACGCCAAGC TCGAAGGCTC TTCCGGTCGT
CCCGACTTTG ACGCCTCCGC ACTGAAAGCC CTGCACAAGA CGCAGATGCT GCCGCCTCCT
CCCAAGGAGG AGTTCCGGGA CCTGCTGCTG GTGTTCAACC TCAACGACAT GATGGGCAAA
CGCTAG
|
|---|
| Protein sequence | MRATSFLLSL GLHCSVLLLV IFWPDSAPIR LDQPVYQVSL VSLGDPGGNR VPNALPGPAG
PPAQAKAEPK PTPGPEKPDA PAIAAPKAEK KPEPKPEPKP EPKPQPKPEP KPEPKVEPKP
EPKAQPKPEP DAKAISEKKK DEPKKPEPET SKDAKDTKKA VAGKDDAKDK AKTEGKPAPS
KDDILKQALA DAQGKAGSTG TAQKSSGTGG KTAGGSVNNA LAEMQKMAAA GGGGGGGGEG
HGSGGGGVGD VYIGQVMAIV RQNWEFPQLA SRQDLQVRVR VTVDASGRIA DAKLEGSSGR
PDFDASALKA LHKTQMLPPP PKEEFRDLLL VFNLNDMMGK R
|
|---|
| |