| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0135 |
|---|
| Symbol | |
|---|
| ID | 4663313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 164632 |
|---|
| End bp | 165996 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639818330 |
|---|
| Product | PDZ/DHR/GLGF domain-containing protein |
|---|
| Protein accession | YP_965586 |
|---|
| Protein GI | 120601186 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3016] Uncharacterized iron-regulated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0450111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTAG CGGCCCGTTG CGCCCTGATT CTCTGCCTGT TCATGCTGAC AGGCGGCTGC
GCCCTTGCGG GGCGGCCGCC TGCGGCATCG CACGGAGTCG TGCCTGTGGC CTCGCCGCAG
GATGACGTGC CGCGCGCCGG ACAGGTCTCC GCCGGTACGG CTGCTGCCGT CCCGGTGGGG
AGTTTCGTGC AGGGCGACGG TTCGCTGATT GCATCTTCCG ATGTCGTGCG CCGCCTCGCC
GGGGCCGACT ACATCCTCGT GGGCGAGTCG CACACCTCGC CGTGCGACCA CCGTCAGCAG
GCGCGCCTGT TGCGCCTGCT GACGGACGCG GGCCTTCGCC CGGTCGTCGG GCTGGAGATG
CTGCCCACCG CCACCAACAA CGCGCTGTGG CGTCTTTCGG CCGGTAGCCT CGGCATCGAC
GCCCTGCCCG ACGCCGTGGA CTGGCGCACC AACTGGGGCT ACGATTTCGC ACTGTACCGC
CCCGTCTTCG AGGTCATCGC CTCTGCGGGG CTACCGGTGC GCGGCCTCAA CCTGCCCGCC
GGACTCGCCC GCAAGGCGGG CCGTGAAGGG CTGGAAGGCC TGCCGCCCGC AGAACGCGCC
CTCATCCCGT CCGTGGTCAT GCCTCCTTCT GAAGGGCAGC GCGCGACGCT GGAAGAGGTC
TTCCGCGAGC ACATGACCAT GCGCGAGATG CGCAAGCCCG GTGGCGCCAC CTCCGCCACA
GGCGCAGCCT CTTCGACCGG AATGCCCTCG GGTACTGCCG CCACCGCGGG AATGCCCACG
GAAACAGTGC AGGCGGCAGC CCCCGCAGCC CCGGAACAGA CCATGCCGGA GGCCATGCGC
CGGGCATTCG ACAGCTTCAT GCTCGTCCAG TCGGTCTGGG ATGCGACCAT GGCCTACGAG
GCTGTGCGCG CCCGCATCGA CATCGGCGGC CCGGTCTACA TCCTTGCGGG TGGCGGGCAT
GTCGAATACG GTTGGGGCAT CGCACGTCGT CTGCGGGGTT TCGACCCCAC CGCGCGCATC
GTGCTTGTCC ATCCATGGCG AGGAGACGGC CCGCCAGACC CGGCACAGGC CGACATATTC
TTCAGATGCG ACGCAGCCCC GCCAAGGCTG GGCCTCGCCT TCACCTTCGA TGACGGACGT
GTCCGCATCG CAGAGGTGCT GCCCGGTTCA CCCGCCGCCA CTGCGGGCTT CTTGCCCGGC
GATGTGGTGC AGACCGCTGG CGGACGCACC GTGGATTCAC CCAAGGTGCT GCACGAGGCC
GGGTCTGCGG CTGCGGCTTC CGGCGCATCC ATCGTCTTCA CCGTGCTGCG CGACGGCGCG
TCGCACACCA TCACCGTCCC CGGCCGTGCC GGGGCGAAAC CCTGA
|
|---|
| Protein sequence | MGLAARCALI LCLFMLTGGC ALAGRPPAAS HGVVPVASPQ DDVPRAGQVS AGTAAAVPVG
SFVQGDGSLI ASSDVVRRLA GADYILVGES HTSPCDHRQQ ARLLRLLTDA GLRPVVGLEM
LPTATNNALW RLSAGSLGID ALPDAVDWRT NWGYDFALYR PVFEVIASAG LPVRGLNLPA
GLARKAGREG LEGLPPAERA LIPSVVMPPS EGQRATLEEV FREHMTMREM RKPGGATSAT
GAASSTGMPS GTAATAGMPT ETVQAAAPAA PEQTMPEAMR RAFDSFMLVQ SVWDATMAYE
AVRARIDIGG PVYILAGGGH VEYGWGIARR LRGFDPTARI VLVHPWRGDG PPDPAQADIF
FRCDAAPPRL GLAFTFDDGR VRIAEVLPGS PAATAGFLPG DVVQTAGGRT VDSPKVLHEA
GSAAAASGAS IVFTVLRDGA SHTITVPGRA GAKP
|
|---|
| |