Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0120 |
Symbol | |
ID | 4663750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 145073 |
End bp | 147592 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639818314 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_965571 |
Protein GI | 120601171 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.554495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.207208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTAT CGCCAGATGG CCCCATGAGC CTTTACGGGG TTCTCGCCCC TCAACTGCCA GCACTGGTTC CGGCGGTCCT GCTGGCCTGC CTTGGCGTCT GCATCGTGCT CATCGCACGC TTGCGTCGGC AGGTCGGGGC GGCACGCCAT GAGAACGACC TGCTCAAGGC CATGCGCATT GCCTCGCCTG TGCCGCTGTG CGTCAAGGAC GTCCATGGCA GGTATCTCGG CTGCAACCAT GCCTTCGAAC TGCTCTTCGG CGTGCGCGAG GCCGACATCC TCGGAGGCAC GGCCGCCGTG GAGCTGCCCC AGCCCCTCGC TGCCGGCGAA TCCGCAGCCG AAGAGAACAT GGCCCGATTC GGCACCTCAC GCCAGACCTT CATGAGCGCC TATGAGTCGC CGGGTGGCCC GGCCCTTGTC CTGCAAGTGG ATTGCGCCAC TTGGCGCGAC GCCTCCGGCG TGCACAAGGG GCAGGTCAAC GCCTACGCGG ACATCACCCC CCTCAAACGG GCAGAGGCGG CCCTGCACGA AAGCGAAGCC CGCAACCGCA TGCTGGTGGA AGAGGCGCCC ATATCCATCA TGAGCTTCGA CGCGGCAGGA CACATCACCT TCGTCAACAA GTGGCACCTG CGTGTCTTCT GCCGCCACAG GGTCGACGCG GGCTTCTTCA TCGGACGCAG GCTCGACGCC TTGCCCGGCC TTGCGCGCGC GGGGCTGTGC GAAAGGGTCG CCCGTGTCCT GCATGGTGAA GAACTGGCCA TCCGCGAAGT GTACTTCCCC GAATTCACGG GAGGGCATGA CGGCTGGGCC AGCATCCGCG GGGTCCCGAT ACACCGCGAC GGTCAGATCG TGGGCGGCAT CCTCATCCGC GAAGACATCA CCGAACGCAA ACGCATGGAG GAGGTTCTTC GCCAGCGCGA GGCGCTCGTC TCATCCATGC TGCGCAACCT GCCCATCGAC TTCTGGGCGG CTGACGGGGA AGGCAGGATG TTGATGCAGA GCGACGAGAG CGTCCGCGTG TGGGGGCACC TGCCCTCCGG CGTGGAACCT CTCACCGGTT CACCGCTCCA GTGGCGCAAC TCCGACAGGT TCGAGCCCCG GGTCTTCGCG GGCGAGACGG TCGAGCGCGA GATCGACGTG GCGCTCCCCT CCGGGCAGAT GCGCACCTTC AACGTCATCG CGGCCCCGGT GCGCTTGCAG GGCGGCATCA CCGCCATGCT GCGGGTGAAC CTCGACGTCA CAGAACGCAA GCGCGTCCTC GCCGAACTGC GCACCGCCCG CGACGCCGCG GAGGCTGCCA ACAAGGCCAA GTCCGAGTTC CTTGCCCACA TGAGCCACGA ACTGCGCACG CCCCTCAACG GCGTCATGGG CATGTTGCAG CTTCTCGACG AGCATGTCGC CGCACCGCAG GGCCGCGCAT GGCTCGACGT GGCCCTTGAA TCCAGTCGCG CGTTGTTGCG CATCCTCAGC GACATTCTCG ACCTGTCGCG CATCGAGGCG GGAAGGCTTG ACCTCATGCA GGAGCCGTTC ACCCCGGAAT CCGTGCTTGC CCCGGTCTTG GTCTCGCTCC ACCGCACAGT CGAAGGCCGG GCAGTACGCA TCGTGAACGA GATGGACGAC TCCATGCCGC CGGTGCTCGT GGGCGACCCG GGTCGCATCA GGCAGGTGCT GCTCAACCTG CTGGGCAACG CCGCCAAGTA CACCGAACGC GGGGAAGTGC GGGTCGGGAT GCGTGTCCTG CGCCGCAACG GCAAGGCGTT GCGGGTGCAC CTGCATGTCA CCGATACGGG GGTGGGCATC GCCGATGAAC AGTTGCAACG CGCTCTCGAA CCCTTCGGCA GACTCCGTCA GGGTTCGGGT CTGCCTCGCG GGGTGGGACT GGGCCTGCCC ATCGTGGTGC GCCTTGTGCG CCTCATGGGC GGGACGCTGT GCATCGCCTC CGAACAGGGC GTCGGCACCG AAGTGCACGT GACCCTGCCC CTTCTCGAGG CAAACGCCGG TGCGGTACCG GTGGCACCGG ACGTGGACGA AGCCGGAGGC ATATGCTCCT TCGCGGCCTT CCGCTGTGCG GGAGTGGTGC CAGAGGCGGA CCGCCTTGCC CCCGGCGAAG CCCCTTCCCC GGCGGTGCGC CATGTCCTGC TTGTGGAGGA CGACCCCGTC AACCTCATGG CCGCCAGACG GATGCTCGAA AGGCTGGAAT GCAAGGTGAC GACGGCGACG TGCGGGCAGG AGGCCCTGAA CGCATTGCGC TCTTCCGTCT TCGATGCCGT GTTCATGGAC ATCCAGATGC CCGACTTCGA TGGCATAGAA GCCTTGCGCC GTATGCGGGC CAAGGGCAGC GGCGTGCTGC GCCCGCAGAC GCCGGTGGTC GCCATGACCG CCTTCGCCAT GAAGGGCGAC CGCGAGCGCT TCATGACCGA AGGCATGGCC GACTACGTGT CCAAGCCCGT GCTCATCTCC GCCCTCAAGG ATGTGCTGGA GAGGCTTGCC GTCACGTCCC CCGGCACCTC CCGCACATAG
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Protein sequence | MAVSPDGPMS LYGVLAPQLP ALVPAVLLAC LGVCIVLIAR LRRQVGAARH ENDLLKAMRI ASPVPLCVKD VHGRYLGCNH AFELLFGVRE ADILGGTAAV ELPQPLAAGE SAAEENMARF GTSRQTFMSA YESPGGPALV LQVDCATWRD ASGVHKGQVN AYADITPLKR AEAALHESEA RNRMLVEEAP ISIMSFDAAG HITFVNKWHL RVFCRHRVDA GFFIGRRLDA LPGLARAGLC ERVARVLHGE ELAIREVYFP EFTGGHDGWA SIRGVPIHRD GQIVGGILIR EDITERKRME EVLRQREALV SSMLRNLPID FWAADGEGRM LMQSDESVRV WGHLPSGVEP LTGSPLQWRN SDRFEPRVFA GETVEREIDV ALPSGQMRTF NVIAAPVRLQ GGITAMLRVN LDVTERKRVL AELRTARDAA EAANKAKSEF LAHMSHELRT PLNGVMGMLQ LLDEHVAAPQ GRAWLDVALE SSRALLRILS DILDLSRIEA GRLDLMQEPF TPESVLAPVL VSLHRTVEGR AVRIVNEMDD SMPPVLVGDP GRIRQVLLNL LGNAAKYTER GEVRVGMRVL RRNGKALRVH LHVTDTGVGI ADEQLQRALE PFGRLRQGSG LPRGVGLGLP IVVRLVRLMG GTLCIASEQG VGTEVHVTLP LLEANAGAVP VAPDVDEAGG ICSFAAFRCA GVVPEADRLA PGEAPSPAVR HVLLVEDDPV NLMAARRMLE RLECKVTTAT CGQEALNALR SSVFDAVFMD IQMPDFDGIE ALRRMRAKGS GVLRPQTPVV AMTAFAMKGD RERFMTEGMA DYVSKPVLIS ALKDVLERLA VTSPGTSRT
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