Gene Dvul_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0007 
Symbol 
ID4662156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp9812 
End bp11113 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content62% 
IMG OID639818200 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_965458 
Protein GI120601058 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCAAC AAGCCCTGCG CCAACATCTC AGGCAGACCT GCTCCGAACA GGAACTGCAT 
CAGTGGTTCG ACCCTCTCGA CCTGCGTCTC GACGATGCGC AGCAGAGGCT CGAGGTGCGT
TTTCCGCATC CCCACTTCGC CCGGTGGTTC GAGGCGCAGG CTCTTGAACG CTTCACCGCC
GGGGTGCGCG ACGTCGTGGG CACGAGTGTG GCACTCGTCT TCCCGGAGGG AATCAAGACC
ACGGACAGGT CCACAGTCCA GCTCCCCCTT GCCAGCGAGT CCGTCGCTTG CCCCTTCGGC
GCCGCGTTCA CGTTCGACGC CTTCATCACC AACCGCAAGA ACCAGTTTCC CCTTGCCGCC
GCGCGCGAGG CTGCGCGCAA CGGTCACCAG CGCACCTACA ACCCCTTCGT ACTGTGCGGT
GCCAGCGGCA ACGGCAAGAC ACACCTGCTG CGGGCACTGG CCAACGAACT GGCGGCCTTG
TACGGAACGG ACGCCGTCTT CTGCGGTTCG GCCGAAGAGT TGCACGACCG TTACAACACG
GAGGAACGCC TTGCCATGCG GCGCACTCTC TGCGCGCACA GGGCACTGCT TCTGGACGAC
CTGCATCGCC TGCGAGCCCT TCCCGACCTC AGGGAGGAAC TCACGGCCCT GTTCGACCAC
TTCTACGACC ATGGCAAACA GATGGCCTTC GCCTATGCGG GCAGACTCTC CGATCTCGAC
TTTCTTGAGG CCCCTCTGCG CTCACGCCTT GAACTTGGCC TTATCGTCGA CCTCAAGGAA
CCCGACCTTG ACGTGCGGGT ACGCTACATC CACGCCCGGT GCGCCGCCCT GTCCCTGCAG
CTGGCACGTG AACACGTGCT CACCCTGGCC CAGCGCTGCC ACGAATTCCG CCATCTCTCG
GGGTTGCTTC TCAAGGTCGC AGCCTACCGT GACATGGTGG GGCGCGACAT CCTCGACCGC
GAACTCGAGC AGATTCTGCG CAACACCGAC AGCGGACCCG AACGGGCCGT GGCACCCGAC
ACCATCATCT CGGCCGCGGC AGAGCATTTC GGCGTCACCC CCCGCGACAT CCTGAGCGAC
AAACGCCAAC AGCACATCGT CCAGGCACGT CAGGTGGCCA TGTTCCTGTG CCGCGAACTC
ATCGGCAGCT CCTTTCCCGC ACTGGGCCGC ATGTTCGGGG GCAAGGACCA TAGCACCGCC
ATGTACGCCG TCAAAAAAAT CAAAAAACTT CAGTATGATA ACAAAGATAT GCACGCTTTG
GTCGCTGAAT TGAAACGTCG GTGTCTAAAC CATGATGGCT GA
 
Protein sequence
MLQQALRQHL RQTCSEQELH QWFDPLDLRL DDAQQRLEVR FPHPHFARWF EAQALERFTA 
GVRDVVGTSV ALVFPEGIKT TDRSTVQLPL ASESVACPFG AAFTFDAFIT NRKNQFPLAA
AREAARNGHQ RTYNPFVLCG ASGNGKTHLL RALANELAAL YGTDAVFCGS AEELHDRYNT
EERLAMRRTL CAHRALLLDD LHRLRALPDL REELTALFDH FYDHGKQMAF AYAGRLSDLD
FLEAPLRSRL ELGLIVDLKE PDLDVRVRYI HARCAALSLQ LAREHVLTLA QRCHEFRHLS
GLLLKVAAYR DMVGRDILDR ELEQILRNTD SGPERAVAPD TIISAAAEHF GVTPRDILSD
KRQQHIVQAR QVAMFLCREL IGSSFPALGR MFGGKDHSTA MYAVKKIKKL QYDNKDMHAL
VAELKRRCLN HDG