| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3799 |
|---|
| Symbol | |
|---|
| ID | 4654550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 4215540 |
|---|
| End bp | 4216862 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639813776 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_961055 |
|---|
| Protein GI | 120556704 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.732609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAAACC ACCTGCAAAA CGCCTCCCTG GGCCGCCAGC TCTACCACAT GACCTGGCCC
ATGCTCTTCG GCGTGCTCTC GCTGATGACC TTCCAGCTCA CCGACAGCGC CTTCGTCGGC
CAACTCGGCC GCGACCCGCT GGCAGCGCTG GGCTTCACCG TGCCCATGCA ACAACTGGTC
AGCGGCATGT ACGTAGGGCT GGGCATTGCC ACCACCGCCA TCATCTCCCG CACACTGGGC
CAGGGCGACG ACATGCGCGC CCAACGCCTG GGCGGCCTGG TGGTCGCCAT TGGGGCCGGC
CTGGCTTTCC TTCTATGCCT GTCGGTCTGG CTCCTGCAAA ACCTGATCCT GGACCTGCTC
GGCGCCGAAC AGGCCCTGCG GCCAGTCATC AGGGAATACT GGGCACCCTG GCTACTCTCC
GCCTGGACCG GCGCCATGGT CTACTTCAGC TACGCCGTGT GCCGCGCCAA TGGCGACACC
CGCCTGCCGG GCTACATGAT GATCATCACC AGCCTGCTCA ACATCGCCCT CGACCCGCTG
TACATCTTCG TCTTCGGCTG GGGCCTGCCC GGCGCCGCCT GGGCCACCAT CACCGCCTTC
GGCATTGGCG CGCTGATCGT CTACCCAACC CTGCTCAAAC GCCAGTGGCT AAGATTCGAC
CTGCTCCAAC TGCAACTGGC TCAGGCCGTG CGCCAACTTG GCGGCATCAT GGCGCCGGCC
ATGGTCAGCC AGCTGATGCC ACCTGTCTCA GCCATGCTGG CCACGGCACT GGTGGCGGGG
TTCGGGTCTG CCGCAGTGGC CGCCTGGGGG CTGGGCACTC GTCTGGAGTT CTTTTCCATT
GTGGTAGTGC TGGCCCTGAC CATGTCCATG CCGCCCATGA TCGGCCGCAT GCTGGGGGCC
GGGGAAATCG AGAAGATCCG CAAGCTCGTT CGTATTGCGG TGCGCTTTAT CGTGATCTGG
CAACTGGCCA TCGGGCTGAT CTGGCTGGCC GCCTCCGGTT TCGTCTCTGG CCTGTTCAGC
CGCGATGCCG GGGTACAAGA CATTCTGGTG AGCTATCTGC TGCGAGTCCC GCTGAGCTAC
AGCGGGCTTG GTGTGTGTAT TCTGATGGTG TCAGTCAACA ACGCGCTGGG CATGCCCATG
CGCGCGTTGC TGATTTCGAC TCTGCGGCTA TTCGCCTGTT ATCTGCCCCT GCTCTGGGTT
GGCGGGCAAC TGGCCGGGCT GACCGGGCTG ATGTCCGGCG CCCTGGTGGG CAACCTGCTG
GCCGGCACCA TGGCCTATAG CCTGTATCGC CAGGGTATGA GCCGGTTGCG CCAGCAGGAG
TAA
|
|---|
| Protein sequence | MQNHLQNASL GRQLYHMTWP MLFGVLSLMT FQLTDSAFVG QLGRDPLAAL GFTVPMQQLV
SGMYVGLGIA TTAIISRTLG QGDDMRAQRL GGLVVAIGAG LAFLLCLSVW LLQNLILDLL
GAEQALRPVI REYWAPWLLS AWTGAMVYFS YAVCRANGDT RLPGYMMIIT SLLNIALDPL
YIFVFGWGLP GAAWATITAF GIGALIVYPT LLKRQWLRFD LLQLQLAQAV RQLGGIMAPA
MVSQLMPPVS AMLATALVAG FGSAAVAAWG LGTRLEFFSI VVVLALTMSM PPMIGRMLGA
GEIEKIRKLV RIAVRFIVIW QLAIGLIWLA ASGFVSGLFS RDAGVQDILV SYLLRVPLSY
SGLGVCILMV SVNNALGMPM RALLISTLRL FACYLPLLWV GGQLAGLTGL MSGALVGNLL
AGTMAYSLYR QGMSRLRQQE
|
|---|
| |