| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3313 |
|---|
| Symbol | |
|---|
| ID | 4653616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 3656267 |
|---|
| End bp | 3657358 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639813291 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_960571 |
|---|
| Protein GI | 120556220 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTCA CACTACGTCA CTCTCCGTTT GTTCTGGTCA GTGCACTACT GGCCGTGCTG
TCTGTTTCCG GCTGCCGCGG TGGCGGCACC GAATCCGGCG AAAACGCTGA AAATACGCCG
GTCGCCGTGC GGGTATCCGC TGTCACCGGG GGCCAGATGG AAGAAATCCC TCTGCGGTTT
TCTGGCATTG TCCGTGCGGC CCAGCGGGCA ACCCTGACAT TTCAGGTCAG CGGGACGCTG
AAGGAACGCC CGGTTGAGCT GGGGCAGACG GTAAAGCCCG GTGATGTGCT GGCGCGTCTG
TACAATCCGG CGCTGGAACC GGCGCGGGAT TCCGCGGCTG CCCGCCTGGA TGAGCTGAGA
ACCCAGTTTG AACAGGCCCA GCGGGAGTGG GAACGCTCCA GCCGGTTGCA TCAGCGAGGC
GTGGTTTCGG AGCAGACGCT GGAACAGATT GCCGCCCGCC GGGATTCGCT GAGGGCGAGC
ATGGCGACGG CCGAAGCCTC ACTGGCCGAA GCCACGAGGT TGCTTGAGGA AAGTGTTCTG
AAGGCGCCCT TTGCCGGGCA GGTGGAAGCA TTGCTGGTGG AGCGGGATGA GTTCGTGGCA
GCCGGGCAGC CGGTCATGCG TTTGTCCTCG CCGCTGGGGC GGGAAGTTGA AGTGCGGGTG
CCCGCGCACT TGCTCGGCCA TGTCCGGATT GGTCAGGAGC TGCCGGTTTG GCTGGTGCAG
GACCGCAACC GAGAACCGGC TACCGGCACT GTGGTGGAGA TTGCCCAGGG CAGTTCCATC
CGTGGTGAAC TGCATCCGGT ACTGGTCAGC CTGCCGCCAA ATTCCCTGTC CTCCGGCGAG
CCGGTGGAAG TGGGCATTGC CCCGGTGCGG GAATCTGCCA TTACCGTGCC CCTGCTGGCG
GTCGTCCGTG ACAGCACCGG CACCAGTGTG TTCCGGGTGC GAGACCAGGT AGCTCAGCGG
GTTCCGGTAG AGGTTGACCG GGTCATCGGT GAGCGCGTGA TGGTACATCC CGGCGCATTG
AGCCCGGGTG ACCAGGTGGT TTACGCCGGT ATGACCCGGC TGGTGGATGG TGACACCGTG
GAGGTGCGCT GA
|
|---|
| Protein sequence | MSLTLRHSPF VLVSALLAVL SVSGCRGGGT ESGENAENTP VAVRVSAVTG GQMEEIPLRF
SGIVRAAQRA TLTFQVSGTL KERPVELGQT VKPGDVLARL YNPALEPARD SAAARLDELR
TQFEQAQREW ERSSRLHQRG VVSEQTLEQI AARRDSLRAS MATAEASLAE ATRLLEESVL
KAPFAGQVEA LLVERDEFVA AGQPVMRLSS PLGREVEVRV PAHLLGHVRI GQELPVWLVQ
DRNREPATGT VVEIAQGSSI RGELHPVLVS LPPNSLSSGE PVEVGIAPVR ESAITVPLLA
VVRDSTGTSV FRVRDQVAQR VPVEVDRVIG ERVMVHPGAL SPGDQVVYAG MTRLVDGDTV
EVR
|
|---|
| |