Gene Maqu_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_3300 
Symbol 
ID4655348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp3641724 
End bp3642926 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content60% 
IMG OID639813278 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_960558 
Protein GI120556207 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTCATT TTCAGCTCGC GTTATTACTT GGTATGACCG TCGCCCTGGG GCCTCTGGCT 
CTGGATGCGT ATTTGCCCGC GTTCCCCGAT ATTGCTGAGG GTTTTGGGAT TCCCCATGCG
GATGTGGGCC TGACGCTGAG TGCCTATGTC GCCACCCTTG GTCTCGCCCA ACTGGTGGGC
GGGCCTTTGT CGGATCGCTA TGGTCGCAAG CTGATACTGT TTGTCGGGCT GACCATTTTC
GCCATTGCTG CGATGATGAT TGCCGGAGCC GATACCCTGG CGGAGTTGGT GGGCTGGCGA
ATTGTACAGG GCATCGGCGG TGCCTTCTGT GCGGTCTCGG TGCCTGCGAT TGTCCGCGAC
CAGGTGGGCG GGCAGGAAGC GGCGCGCCTG TTCGGCCTGA TTGGCCTGAT CATGTTTATT
GCCCCGGCTG CGGCACCTTC ACTGGGTGCG TTGATGCTTG CGCTCGGCGA TTGGCACTGG
ATTTTCGTAT TTCTGGCCGG CTACGCGCTC TTGCTGGCGG TCGTGCTGCA AATCGCCCTG
TTTCCCAGGT TGAAACCCAG GCCCCAGGCT TCGACGCCGG TGAAAACTCT GGTAACCAAC
TACATGCTGG TGCTTCGCCA CGGCACAACC ATGCGCTTTA TCGGGATTCA GGTGATGTGC
TTCAGCACCA TGCTGCTGTT CATTACCCAT TCGTCGTTTA TCTACCAGGA GTGGTTCGGC
CTGTCCAACG CCAGTTTCTC TATGCTGTTC GCGGCCAATA TCGGATTGAT GGCGGTGCTG
AATCTGGTCA ACCGGCCGCT GTTGCGGCGC GTCCCATCAG TCATCCTGTT GCGGGTACAG
GTTATGCTGC AGTTCCTGAT GTTGGTCGGG TTGGTTACCG TGGTCATTCT GGACGGGCCG
TTCTGGGCGG TGGCGTTGTT CATCATTGGC GCCATTGGCT GTCAGGGCGG GATCGTGCCT
AACAACATGG CCAATGCGCT GGAGTTCTTC CCGCATCTGG GCGGAACCGC CGCCGCTATG
CTGGGCGCCT CTCAATTCAC CCTGGCTGGA GGGATCAGTG CGCTGTCATC GGCTTTAGGA
GGTGATGCAC TGCTGCCTAT TGTGCTGAGC ATGCTGGTCT GCTCGGCTGG CGCGGTGGTG
CTGGCGGCCG GAGCTCCAGC CGCGATTGCC CGGGAAAAGG CCAGGGCCGA AACCCTGGCC
TGA
 
Protein sequence
MSHFQLALLL GMTVALGPLA LDAYLPAFPD IAEGFGIPHA DVGLTLSAYV ATLGLAQLVG 
GPLSDRYGRK LILFVGLTIF AIAAMMIAGA DTLAELVGWR IVQGIGGAFC AVSVPAIVRD
QVGGQEAARL FGLIGLIMFI APAAAPSLGA LMLALGDWHW IFVFLAGYAL LLAVVLQIAL
FPRLKPRPQA STPVKTLVTN YMLVLRHGTT MRFIGIQVMC FSTMLLFITH SSFIYQEWFG
LSNASFSMLF AANIGLMAVL NLVNRPLLRR VPSVILLRVQ VMLQFLMLVG LVTVVILDGP
FWAVALFIIG AIGCQGGIVP NNMANALEFF PHLGGTAAAM LGASQFTLAG GISALSSALG
GDALLPIVLS MLVCSAGAVV LAAGAPAAIA REKARAETLA