Gene Maqu_2966 details

Gene Information

• Locus tag: Maqu_2966
• ID: 4656056
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: -
• Start bp: 3300095
• End bp: 3300739
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639812946
• Product: hypothetical protein
• Protein accession: YP_960227
• Protein GI: 120555876
• COG category: [K] Transcription; [S] Function unknown
• COG ID: [COG1278] Cold shock proteins; [COG3326] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATCAAA AAGGCTTACT CACCTCATGG AACGACGCCA AGGGTTTCGG TTTTATCACG 
CCAGAGAACG GTGGCGAGCG TCTGTTTGCC CACATCAGCG CCTATCAGGG CCGGGGCAGG 
CCCTCGGCCA GCCGCAAGGT GGTCTACGCA CAGACAAAAG ATGAGAAGGG GCGGCTGAGG 
GCGTCCAGTT TCCAGTACGC TGGCGTGGCG AGACACAGCG CAGCGGTCGC CACGGGCGTT 
TGGTTTGCTC TGTTGATTGC CGCTGCAGTC GCAGGGGCGG TTTCTGTGTT GTACGTTCAG 
GGTTATGTGC CAGTGCTGTT GCCGGCGGCC TATGGCGTAA TGAGTGTAGT GACCTTCTTG 
ATGTATGCCG TCGATAAGGG GGCAGCTGAG AGCGGCGGGA GGCGTGTCCC CGAGGGGCGG 
TTGCATCTGT TTGAACTCCT GTGCGGCTGG CCGGGGGCAC TGGTGGGCCA GCAATTCTTT 
CGCCATAAAA CCAGAAAGAC CTCGTACCAG GTGTCTTTCT GGTTCAATGT CGTCCTCAAT 
CTCGCAGTGT TTTGCTGGTT GTTACTGTGG CCGGGCGCTG AGTTCGTCAG GCAGGCGCTG 
GAGATCAGGC CGGTTATGCT TCTAGGATTC AATTTCCAAG GTTAA 

 

Protein sequence

MNQKGLLTSW NDAKGFGFIT PENGGERLFA HISAYQGRGR PSASRKVVYA QTKDEKGRLR 
ASSFQYAGVA RHSAAVATGV WFALLIAAAV AGAVSVLYVQ GYVPVLLPAA YGVMSVVTFL 
MYAVDKGAAE SGGRRVPEGR LHLFELLCGW PGALVGQQFF RHKTRKTSYQ VSFWFNVVLN 
LAVFCWLLLW PGAEFVRQAL EIRPVMLLGF NFQG