| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1893 |
|---|
| Symbol | |
|---|
| ID | 4654330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2111448 |
|---|
| End bp | 2112356 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639811864 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_959161 |
|---|
| Protein GI | 120554810 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.288901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTTC AGGCTTTGAT TCCTGTCTTC GTGCTGATCA TGTTGGGCCA TGGCTTGCGC
CGCGTGGACT TTCCCGGAGG TGATTTCTGG CCCCGTGCGG AGCGCTTCAC CTATTACGTG
CTGTTTCCTG CCATGCTGGT GTTCAAGCTT GGGCAGGCCC GGCTGCCTCC TTCGGCCTAC
GGTGATACGG CGATGCTGAT TATCGCCATG CTGCTGGCGA TGACGCTGGT GCTGGTGGCT
GCACAGTGGC TCTGGGGCTG GTCTGGTCCG GTGTTTTCAT CGGTATACCA GGGTGCGATT
CGTTTCAATT CCTACGTGGG CCTGGCCGCG GGTGGCATGC TCCTGGGGGA TGATGGGCTC
TCGCTCACGG CCATCGCCGT GGCCATTATG GTGCCGTTGT TAAACCTGCT GTGTATTCTG
ATGTTCGCGC TGGTAGCGGG GCGAGAGCGA ATCAATCTGG CTGCGGTGAT TCGGGCGATT
GTCACCAACC CGTTGATCGT CGGTTCGGTC ATTGGCGTGC TCTGGAGCTA TTTTCAGGTA
GGGTTTCATC CCTTGCTGGC GGGCATACTG GAGCCGTTGA GTAATCTGGC GCTGCCGATG
GGGTTGATGT GCGTGGGAGC TGGCTTGCAA CTCAGTGCAC TGCGTGGCGG TTCGGTTCCG
TTTATTGTGT CGTCGGCCCT GAAACTGGTG GCGTTTCCGC TGATGACGGC GGGTCTGGCC
TGGATGCTCG GGCTGGGGGG GCTGCTGGTG CAGGTGGCGG TGCTGCTGGC AGCCTTGCCT
ACCGCTACGT CGGCTTACAT TCTAGCGCGC CAGCTTGGCG GGGACGCGCC GCTGATGGCA
GGCATCATCA GCGGGCAAAC CTTGTTGGCG ATGGTCTCTA TTCCGGTGCT ACTGAGTCTG
CTTTGGTAA
|
|---|
| Protein sequence | MVVQALIPVF VLIMLGHGLR RVDFPGGDFW PRAERFTYYV LFPAMLVFKL GQARLPPSAY
GDTAMLIIAM LLAMTLVLVA AQWLWGWSGP VFSSVYQGAI RFNSYVGLAA GGMLLGDDGL
SLTAIAVAIM VPLLNLLCIL MFALVAGRER INLAAVIRAI VTNPLIVGSV IGVLWSYFQV
GFHPLLAGIL EPLSNLALPM GLMCVGAGLQ LSALRGGSVP FIVSSALKLV AFPLMTAGLA
WMLGLGGLLV QVAVLLAALP TATSAYILAR QLGGDAPLMA GIISGQTLLA MVSIPVLLSL
LW
|
|---|
| |