Gene Maqu_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_1537 
Symbol 
ID4654852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp1715637 
End bp1717379 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content57% 
IMG OID639811502 
Productlytic transglycosylase, catalytic 
Protein accessionYP_958808 
Protein GI120554457 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.324928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTAA AACGACTGCC CTTCATCCTT CTCGCGTCAA CCCTTTTCAG CGGCTGCAGT 
ACCAGTCAGA TCGCCGAAAA CTGGCATACA CCTTCGGCCT GGTTCGGGAC CGAGGAAGAG
AATCAGCAAA AAGACCCCCT GGACTCACAG CAAGTGGTTG TTGCCAAGGG CGATGAGGAC
CTCAAGGCTG ACGTCGCTGC CGGCAATGGA GAGGACAGTA CCAGCGGGGC ACCATTAGAT
GACGCCATCT CCCCGGAACT TCAGGCCAAG GCCCAGCAAG CTCGGGAAAA ACTGGACAAT
CCCGCCCGGC AATCCGACGT ATCCACCAGA ACAGACGATC TGTGGTCACG ACTTCGCGCC
GGTTTCACCA TGGATCACTC CGTCGACAAT GCCAGGGTAC AGGCTCAATT GGACTGGTAC
GTGCGCCACC CCCGTTACAT CGATCGCGTG GTGGAAAGAG GCTCCCGGTA CCTGCATTAC
ATTATCAATG AAATCGAAAA ACGCGGCCTG CCCAGCGAAC TGGCTCTGTT GCCAGTGGTA
GAAAGCGCCT TTGATCCTTT TGCCTACTCC CACGGTCGCG CTGCCGGGCT TTGGCAGTTC
ATCCCGTCTA CCGGCAAATA CTTCGGGCTG ACCCAAAGCT GGTGGCATGA TGACCGACGG
GACGTCATTG CGGCTACCGA TGCTGCCCTG ACTTACCTGG AGCGCCTGGC CAACCGGTTC
GACGGCGATT ACACCCTGGC CCTGGCCGCT TATAATTCCG GGGGCGGGAC CGTATCCAGC
GCCATGCGCC GCAACCGCAA CGCCGGAAAA GCCACAGACT ACTGGTCTCT GACATTACCG
ACGGAGACCC GCCACTATGT GCCCAAACTG ATTGCCCTGG CAAAAATTTT CGACGATCCG
AAAGCCTACG GTATCGACCT GCCACCATTA AAAGACGAAC CGTATTTCGA AGTGGTGGAT
ACCGGCTCCC AGCTGGACCT GGCCCAGGCC GCAGAACTAG CCGGCGTGGA TATTGATGAA
ATCTATCTGC TGAACCCGTC CTACAATCGC TGGGCAACCA ATCCGGATGG CCCCCATCGC
TTGCTGGTAC CCAAGCAACA GGCCGAGGCA TTCCAAACCG CACTGGCAGA GTTCCCAAGC
GAACAGCGTG TATCCTGGCA GAACTATAAA GTCCGCAAGG GTGACAGCCT GAACACCATT
GCCCGCAAGT TCTCCACTAC CCCATCGGTC ATTCAACAGG TCAACAAGCT CAACAGTGAC
CTGATCCGGA TTGGCCAGCA ACTGTTGATT CCGTCTTCCA CCAAGGGCTC CGACGCCTAT
GCGCTAAGCC AGGCCCAGCG ACTGGAGCGA ACTCAGGAAC GCAAGCGTAG CGGCAACAAG
GTACGGTACA CCGTGCGCCG GGGCGATACT TTCTGGGATA TTGCCAGGGA GCACCGGGTT
TCGGTTCGGG AAGTGGCTGC CTGGAATGGC ATGGCACCGG GAGACCCCCT GATTCCAGGC
AAGGAACTGG TGATCTGGTC GAAAACTTCA AAGCCGACCA TGGTAGCTTC GAATACCCGT
GGCAAGGCCA TGGTGCGCAA GGTGGGATAC CGGGTTCGCA GCGGCGACTC CCTGTCCGCC
ATCGCCAGCA GGTTTTCCGT GAATGTGCGT GACATCGCAT CATGGAACGA TCTTAATACG
GACCGTTATC TCCAACCCGG CCAAAGTCTG GTACTCTACG TGGACATAAG AAACAGTCCG
TAA
 
Protein sequence
MPVKRLPFIL LASTLFSGCS TSQIAENWHT PSAWFGTEEE NQQKDPLDSQ QVVVAKGDED 
LKADVAAGNG EDSTSGAPLD DAISPELQAK AQQAREKLDN PARQSDVSTR TDDLWSRLRA
GFTMDHSVDN ARVQAQLDWY VRHPRYIDRV VERGSRYLHY IINEIEKRGL PSELALLPVV
ESAFDPFAYS HGRAAGLWQF IPSTGKYFGL TQSWWHDDRR DVIAATDAAL TYLERLANRF
DGDYTLALAA YNSGGGTVSS AMRRNRNAGK ATDYWSLTLP TETRHYVPKL IALAKIFDDP
KAYGIDLPPL KDEPYFEVVD TGSQLDLAQA AELAGVDIDE IYLLNPSYNR WATNPDGPHR
LLVPKQQAEA FQTALAEFPS EQRVSWQNYK VRKGDSLNTI ARKFSTTPSV IQQVNKLNSD
LIRIGQQLLI PSSTKGSDAY ALSQAQRLER TQERKRSGNK VRYTVRRGDT FWDIAREHRV
SVREVAAWNG MAPGDPLIPG KELVIWSKTS KPTMVASNTR GKAMVRKVGY RVRSGDSLSA
IASRFSVNVR DIASWNDLNT DRYLQPGQSL VLYVDIRNSP