Gene Maqu_1263 details

Gene Information

• Locus tag: Maqu_1263
• ID: 4653650
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 1424063
• End bp: 1424830
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 639811232
• Product: TIR protein
• Protein accession: YP_958540
• Protein GI: 120554189

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0901664
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAATTCC TAAAGTATGA GTTAGGTAAC CGAAAACGGG GGGAAGTAGT TGAAGTTACT 
CTTACAAGTG GAGCAAATGT TCGCCTGCTA ACCAGTTCGG AATTCTCAAA TTACAAGAAT 
GGTAGGCGAC ATAGTTTCAT TGGTGGCCTA GCAAAACGGT CACCGGTGCG GCTACAAATA 
CCAAACTCAG GAAACTGGGT TGTAGTGGTT GACATGCAAG GTTTGAGAGG AAGCACCAAT 
GCATCTGTAA GAGTGGTCCC TGGTGCTCTC CCAGAGATTC AAGAACGCCC CTTATCTGAA 
ATCCCGAGTC TCGTACGAGA TGATATTCCG CCTCCCGCTG AAACTGGAGG TGAAACCCAC 
GACGTTTTCA TATCTCACGC TTCGGAGGAC AAGGACGAAT TTGTAAGGCC TCTAGCTTCG 
GCGCTTATGG GTCGTGGACT GAATGTATGG TTTGACGAAA TGACCCTGAG AATCGGCGAC 
AGCTTAAGAC AAAAAATTGA TCGAGGACTC GCGAATAGCC GTGTAGGACT AGTCGTTCTC 
TCTCCAGATT TCATTAAGAA GGGGTGGACG AACTATGAGT TGGATGGAAT CGTGACGCGC 
ACAGTATCTG GTGAGCAAAT ACTTCTTCCT ATTTGGCATA ACATTACGAA GCAGCAGGTT 
GTGGATTTTA GCCCCTCCTT AGCGGATAAA GTCGCTCGCA GTACGGCCAC TCATACAATT 
GAGGAGATTG CGGCCGAGAT TTCAGATCTT TTGGAATCAA GGGCATAA 

 

Protein sequence

MKFLKYELGN RKRGEVVEVT LTSGANVRLL TSSEFSNYKN GRRHSFIGGL AKRSPVRLQI 
PNSGNWVVVV DMQGLRGSTN ASVRVVPGAL PEIQERPLSE IPSLVRDDIP PPAETGGETH 
DVFISHASED KDEFVRPLAS ALMGRGLNVW FDEMTLRIGD SLRQKIDRGL ANSRVGLVVL 
SPDFIKKGWT NYELDGIVTR TVSGEQILLP IWHNITKQQV VDFSPSLADK VARSTATHTI 
EEIAAEISDL LESRA