| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1199 |
|---|
| Symbol | |
|---|
| ID | 4656886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 1360840 |
|---|
| End bp | 1362507 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639811166 |
|---|
| Product | thiamine ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_958477 |
|---|
| Protein GI | 120554126 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.60189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACAC ACGCGAGTGC CGCCCCCTTC AGCCATCCTG GCTGGCAAAT CTGGCCCGGC
CTGTTACTCG GCACCGGGCT ATTGCTGCTC GTGGCACTTG GCTTGGGGAG CATACTACAG
GAGGCCGGAG AGCTGGATCC GGGGCGCACG CTGGCAAGTT CCTATTTCCA GAGCGTGGTC
CGATTTACCC TTTGGCAGGC CTTTTTATCT GTCCTGTTAA GCCTGGCGCT GGCGCTCCCG
GTAGCGACCG CCCTCGCCCG CTACAGAGGC TTCCCTGGTC GCACATTGAT TCTGCGGCTG
ATGGAGTTGA GTCTGGTCTT ACCCACTATC GTGGCAGTCT CAGGCATCAT AGCGGTGTTT
GGTCGGCAGG GCTGGTTAAC CGGTCTGCTC AATACTTGGC TTCCTGGAAA TGGTTGGAAT
CTTTATGGGC TGACCGGCAT TCTGCTCGCC CACGTGTTCT TCAATGCGCC ACTGGCGGCC
CGAATCCTGT TGCAGGCTCT GGATTCCATA CCCGCGCCAC GAATGAGAAC AGCTTCTCAG
CTTGGGCTCG GCGGCTGGTG GCTGTGGCGT GCGGTACACT GGCCCGCCAT CAAACCGGTA
CTGCCCGGCG TGGCGGCACT GGTGTTCACG CTGTGCTTCA CCAGTTTTGC CATCATCATG
ACGCTGGGCG GAGGGCCAGG AACAACGACC CTGGAAGTCG CCATCTACCA GGCCCTGCGC
TTTGAATTCG ATTTCGCCCG TGCCGCGCTG TTTGCCATTC TGCAGCTGTT GATCTGTGGC
AGCCTCTGGT GGCTGGTTTT CAGGAAGCGT CTGGACACAG CTGTACTGCC AAACCGCCGG
TTATCACGTC CGGTCCCTCT GTTTGCACGG CCCTGGCAAG GGTTTTCAGC GGGTCTGCTC
CTGGCGATTT TCACGGCCTT TCTGGTCGCG CCACTGCTGG CTATTATCCT GCGCGGTTTG
CCGGCGTTAT GGCCAACGGC GGAGACTACT TCTATTTACC AGCAGCTCTT GCCGGCCACC
GCCCGCAGCC TGTTCATCGC CCTTCCAGCC GGGCTGGGCT CGGTGCTCGT TGCCTTGCTA
ACTCTGGCAG CCGCCAACCG GGCTGGTCGG CGCTGGCTGG CCATAGTGCC AGCCGTCACC
GGCTATCTCC CCTTAATCGT TCCGCCTCTG GTACTGGGGA CCGGACTTTT TATTCTGTTA
AGGCCGCAAT TGGGGAATAC CATGCAGGGC TGGTTCCTGG TGGCACTGAT CAACGGGCTG
ATGGCCGTGC CGTTTGTGCT ACAGATACTG CGCGGACCTC TCGCAAGCCT AGACTCCGGA
TCACTCAAAC AGGCAGACCA ACTGGGCATC CTGGGCTGGT ATCGATGGCG ATGGCTGTAT
TGGCCGTATC TGCGCCGTCC AGTTGCTCTG GCCCTGGCGT ATGGTGTGGC ATTATCTCTG
GGTGACTTCG GTGTTATCGC CCTGTTCGGC AGTCCCGGCA AACCCACTCT CCCCGTTTTG
CTATATCAGC AACTGGGTAG TTACCGCTTA GGGGAGGCCG CAGGTACCGG ACTCTGGCTG
TTGGGGTTAC TGATACTGAT TTTTGTATCG CTCTCCCGTG TTCCCGGCAT TAAGTCCAGA
ACAACTTCCG CTGCGAGCCA ACCACTGCCG GAGCCTGAAC ATGCTTGA
|
|---|
| Protein sequence | MPTHASAAPF SHPGWQIWPG LLLGTGLLLL VALGLGSILQ EAGELDPGRT LASSYFQSVV
RFTLWQAFLS VLLSLALALP VATALARYRG FPGRTLILRL MELSLVLPTI VAVSGIIAVF
GRQGWLTGLL NTWLPGNGWN LYGLTGILLA HVFFNAPLAA RILLQALDSI PAPRMRTASQ
LGLGGWWLWR AVHWPAIKPV LPGVAALVFT LCFTSFAIIM TLGGGPGTTT LEVAIYQALR
FEFDFARAAL FAILQLLICG SLWWLVFRKR LDTAVLPNRR LSRPVPLFAR PWQGFSAGLL
LAIFTAFLVA PLLAIILRGL PALWPTAETT SIYQQLLPAT ARSLFIALPA GLGSVLVALL
TLAAANRAGR RWLAIVPAVT GYLPLIVPPL VLGTGLFILL RPQLGNTMQG WFLVALINGL
MAVPFVLQIL RGPLASLDSG SLKQADQLGI LGWYRWRWLY WPYLRRPVAL ALAYGVALSL
GDFGVIALFG SPGKPTLPVL LYQQLGSYRL GEAAGTGLWL LGLLILIFVS LSRVPGIKSR
TTSAASQPLP EPEHA
|
|---|
| |