| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0900 |
|---|
| Symbol | |
|---|
| ID | 4656331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 1028842 |
|---|
| End bp | 1030608 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639810863 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_958183 |
|---|
| Protein GI | 120553832 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAT TTGCAATCAA CATTATGTTC GTAGGGGGCT CGTTCCTCCT CTACATCGCC
ATCGCTGTCT GGGCCAAGGC AGGCAGTACC AGCGATTTCT ACGTTGCGGG CGGTGGTGTG
CATCCTATCA CCAACGGCGC CGCAATCGGT GCTGACTGGA TGTCTGCCGC TTCGTTTATC
TCCATGGCTG GTCTGATCGC GGCCGGTGGC TATGCCAACT CCACGTTCCT TATGGGCTGG
ACCGGTGGCT ACGTCCTGTT GGCCATGCTG CTGGCTCCTT ACCTGAGGAA GTTCGGTAAG
TTTACGGTTC CTGAGTTCAT CGGGGATCGA TACTACAGCG CAAACGCGCG ACTGGTAGCC
GTTATCTGTC TGATCGTTGC CTCGGTAACC TACGTTATCG GCCAGATGGC TGGCGCTGGT
GTGGCCTTCT CCCGCTTCCT GGAAGTGGAT GCCACCACCG GTCTGATCAT CGCAGCAGTT
GTTGTATTCG TCTATGCGGT ACTCGGTGGC ATGAAAGGCA TTACCTACAC CCAGGTAGCA
CAGTACTGTG TACTGATTGT CGCTTACACG ATTCCCGCAG TATTCATTTC CATTCAACTG
ACAGGCAACC CGATTCCGGG CCTGGGCATG TTCTCTACCC ATACCGACTC TGGCTTGCCG
CTGCTTGAGA AGCTGAACCA GGTCATCACT GATCTCGGAT TCAACGAATA TACCGCTGAT
GTGGACAACA AACTGAACAT GGTTCTGTTC ACACTGTCCC TGATGATCGG TACTGCCGGT
CTGCCACACG TTATCATTCG TTTCTTCACT GTGCCCAAGG TGGCTGACGC GCGCTGGTCT
GGCGGCTGGG CCCTGGTCTT CATTGCCCTG CTGTACCTGA CGGCTCCTGC TGTCGCTTCC
ATGGCTCGCC TGAACCTGAT GACCACTATC TACCCGGACG GAACCCAGGC CGCCCCCATC
GAATATGATG AGCGCCCGAA CTGGGTCAAG GAATGGGAAG TAACGGGTCT GATTCAGTTT
ACCGACAAAA ACGAAGACGG CCGTATCCAG CTTTACAACG ACGTACCTGC GTTTGAAGCT
GAAGCCCAGG CCCGCGGCTG GAACGGCAAC GAACTGGTGG TTAACCGTGA CATCCTGGTA
CTGGCCAACC CCGAAATCGC CAACCTGCCA GGCTGGGTCA TTGGCCTGAT CGCAGCCGGT
GGTCTTGCAG CCGCGCTGTC GACAGCCGCC GGCCTGCTGC TGGCGATTTC CTCGGCGGTG
AGTCACGACC TTATCAAGGG ACGATTCAAC CCCAGTATCA GTGATAAGGG CGAACTGATG
GCTGCCCGGA TATCCATGGC CGTTGCCATT GTGGTCGCCA CCTATCTCGG TGCAAACCCG
CCAGGGTTCG CGGCACAGGT TGTTGCCCTG GCATTCGGTA TCGCGGCAGC CTCGCTGTTC
CCGGCACTGA TGATGGGTAT CTTCTCCAAG CGCGTAAACA ACGTGGGCGC AACCCTGGGT
ATGCTCTCCG GCCTTCTGTT CACACTGATC TACATCTTTG TGTACAAGGG CTGGCTGTTC
ATCCCGGGCA CCAACAACCT GCCGGACACC CCGGAAAACT GGGTACTGGG TATTTCCCCG
CTGTCCATCG GCGCGGTTGG TGCACTGGTT AACTTTGCGG TAGCCTTCGC AGTATCGAAA
GCGACTGCAG AGCCGCCCGT TGAAATTCAG GAACTGGTTG AAAGTGTCCG TTACCCGCGT
GGTGCCGGTA CCGCCCAGGA TCACTGA
|
|---|
| Protein sequence | MSQFAINIMF VGGSFLLYIA IAVWAKAGST SDFYVAGGGV HPITNGAAIG ADWMSAASFI
SMAGLIAAGG YANSTFLMGW TGGYVLLAML LAPYLRKFGK FTVPEFIGDR YYSANARLVA
VICLIVASVT YVIGQMAGAG VAFSRFLEVD ATTGLIIAAV VVFVYAVLGG MKGITYTQVA
QYCVLIVAYT IPAVFISIQL TGNPIPGLGM FSTHTDSGLP LLEKLNQVIT DLGFNEYTAD
VDNKLNMVLF TLSLMIGTAG LPHVIIRFFT VPKVADARWS GGWALVFIAL LYLTAPAVAS
MARLNLMTTI YPDGTQAAPI EYDERPNWVK EWEVTGLIQF TDKNEDGRIQ LYNDVPAFEA
EAQARGWNGN ELVVNRDILV LANPEIANLP GWVIGLIAAG GLAAALSTAA GLLLAISSAV
SHDLIKGRFN PSISDKGELM AARISMAVAI VVATYLGANP PGFAAQVVAL AFGIAAASLF
PALMMGIFSK RVNNVGATLG MLSGLLFTLI YIFVYKGWLF IPGTNNLPDT PENWVLGISP
LSIGAVGALV NFAVAFAVSK ATAEPPVEIQ ELVESVRYPR GAGTAQDH
|
|---|
| |