Gene Maqu_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0558 
Symbol 
ID4654172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp632570 
End bp634240 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content64% 
IMG OID639810510 
Productputative transcriptional regulator 
Protein accessionYP_957846 
Protein GI120553495 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.411338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCAAG CCGAACAGGA AATCCAGACG CTCATTCGCG GCGGCGAGAG CCTCGCCGTC 
GAGTTCAAGA GCGACGTCAA AAGCCTGCCG GACCGGGACC TGGTAGCTGC GGTGGTGGCC
CTGGCCAACA CCGAGGGCGG CGACCTGTTC CTGGGAGTTG AAGACGATGG CACCCCGACT
GGGCTGCATG CCAATCATCG CAACCTCGCC GGCCTGCCCG CACTGATTGC CAACAAGACC
ATCCCTTCGC TGGCCGTGCG CGTTGAGACC CTGGAGCTGG AGGGACAACC TATTGCCAGG
ATCCAGGTGC CCAAGTCCCG GCAGCTGGTG TCCACCTCGG ATGGCCTGCT GCAACGTCGG
CGCCTGAGAA TGGACGGCAC TCCGGAGGCC GTGCCCTTCT ACCCCCATGA GTTTGTTCAG
CGCCAGTCCA GCCTGGGGGT GACGGATCCC TCTGCGTTGC CGGTAGAAAA CCTGGCGGTT
GAGGACCTGG ACCCGATTCA GCGCATCCGA ATCCGCAACG CCATCAAGAA GTACGGCGGC
GATCAGAGCC TGATGCCCCT GGCGGACGAT GAGCTGGACG GCGCCCTGGG GCTGACTGTG
AGCGTGGGAG GCATGCGCCG CCCCACGGTT GCAGGCCTGT TGCTGCTGGG GAACGAAATG
CAGCTCCGGC AACACCTGCC CTCCCACGAG GTAGCCTTCC AGGTGCTGCG CGGTACCGAT
GTCCTGGTCA ATGAGTTCTA CCGCAAACCA CTGCTGGAGA CCTTCGAAGA GGTCGAAGTG
CTATTCCGCG CCCGGGTGGA GGAAGAGGAG ATTCAGGTCG GGCTGTTTCG CGTGCCCATC
CCCAACTTCG ACCGCCGGGC CTTCCGGGAA GCCTTTGTGA ACGCCCTGGT TCACCGCGAC
TACAGCGCCC TGGGCGCCGT ACACGTCAAA CTGGACGACG ACGGCCTGAG CATCAGCAAT
CCCGGTGGTT TTGTGGAGGG CGTTAATCTG GACAACCTGC TGGTGGCTGA CCCTCGCTCC
CGTAACCCCT TGCTGGCTGA CATTATCAAG CGCATCGGCC TGGCCGAACG CACGGGCCGA
GGCATCGACC GGATCTTCGA GGGTATGCTC CGCTACGGGC GCACCGCCCC CGACTACTCC
ATGTCGTCCG CTCACACCGT CTCCGTGCGC ATGAGCGCAG CGGACGCGGA CGCCGAATTC
CTGCGCATGA TCGTCGAGCG CGAGGAGCAG ACCGGCGCCG CCATGCCCAT TGACAGCCTG
ATCATCCTGT CCCGGCTGCG TAATGAGCGG CGCTTAAGAA CGGCGGACCT GGCCAAATCC
GTGCAGAAGC CCGAAACCGT GGTCCGGGGT ACCCTGGAAA AACTGGTGGA AGCCGGCATG
GTGGAAGCCC ACGGAACCGG CAAGGGCCGC ACCTACACCT TGGGCGCCAA GGTATACCGG
GGAGCGGGGC AAAAAGCCGC CTATGTGCGC CAGGCGGGCT TCGATGCCAT CCAGCAGGAG
CAGATGGTGC TGAACTTCAT CGATACCCAC GGCAGCATCA AGCGAGCGGA TGCCGCCGAT
CTGTGCCATA TCAGTCCTTT CCAGGCCACT CGGCTGCTCA ACCGCTTGAA AGACAAGGGC
GTGATACGCC CGGTAGGCCA GGGGAAGGGG ACCCGATATG AGCGAAGCTG A
 
Protein sequence
MHQAEQEIQT LIRGGESLAV EFKSDVKSLP DRDLVAAVVA LANTEGGDLF LGVEDDGTPT 
GLHANHRNLA GLPALIANKT IPSLAVRVET LELEGQPIAR IQVPKSRQLV STSDGLLQRR
RLRMDGTPEA VPFYPHEFVQ RQSSLGVTDP SALPVENLAV EDLDPIQRIR IRNAIKKYGG
DQSLMPLADD ELDGALGLTV SVGGMRRPTV AGLLLLGNEM QLRQHLPSHE VAFQVLRGTD
VLVNEFYRKP LLETFEEVEV LFRARVEEEE IQVGLFRVPI PNFDRRAFRE AFVNALVHRD
YSALGAVHVK LDDDGLSISN PGGFVEGVNL DNLLVADPRS RNPLLADIIK RIGLAERTGR
GIDRIFEGML RYGRTAPDYS MSSAHTVSVR MSAADADAEF LRMIVEREEQ TGAAMPIDSL
IILSRLRNER RLRTADLAKS VQKPETVVRG TLEKLVEAGM VEAHGTGKGR TYTLGAKVYR
GAGQKAAYVR QAGFDAIQQE QMVLNFIDTH GSIKRADAAD LCHISPFQAT RLLNRLKDKG
VIRPVGQGKG TRYERS