Gene Maqu_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0429 
Symbol 
ID4653834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand- 
Start bp489846 
End bp490487 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content59% 
IMG OID639810380 
Productsecretion protein HlyD 
Protein accessionYP_957717 
Protein GI120553366 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.398543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGTA TGCTGACCCT GTTTATCTCG CTGCTCATTT TGTCTGGTTG TCAGCAGTCT 
TCGGAACCGC CCCCAGAGGC CCGCGCCCCT ATCCCCTGGG TAAAAACAGT TGAACTAAAG 
GACGCCGGCC CAACAGCGCA CAGATTTTCA GGAACCCTGC GAGGCCGTCA CGAAGTTCCT 
CAGGCCTTTC AGATCGCCGG CCGGATTCAG CATCGTTACA TCGATTCCGG TCAGCGAGTG 
AAACAAGGCG ACTTACTGTT CAAGCTCGAT ACACGAGACC TTGTGGCAAC GGCGGAGGGG 
GCCGCCGCGG ATCTGAGGCG TGCAGAAGCG GCCCTGGCCA TTGCCACCGA TGAGCTCCAG 
CGCCAGCAGC AACTGGTAGG GCGTCAGTTT GTCAGCGAAC AAACCCTGCG ACGCCTTGAA 
TTGGCCGAGC GCGAGGCGCG CAGCCAGGTG GAAACGGCTT CTGCACGCAA TCAGCAGGCT 
CAGAATGCCC TGGGGTATGC GGAACTAAAA GCCGCCCATG CAGGCGTGGT CACTGAGGTC 
ATCGTTGAAC CCGGCCAGGT TGTGGGTGTG GGTCAAACCC TTGCCGTTCT GGCCGAAGAT 
GAATCGCTGG AAGTCGAGGT TTTTTTTACC AGAGGGCAGT AA
 
Protein sequence
MRCMLTLFIS LLILSGCQQS SEPPPEARAP IPWVKTVELK DAGPTAHRFS GTLRGRHEVP 
QAFQIAGRIQ HRYIDSGQRV KQGDLLFKLD TRDLVATAEG AAADLRRAEA ALAIATDELQ 
RQQQLVGRQF VSEQTLRRLE LAEREARSQV ETASARNQQA QNALGYAELK AAHAGVVTEV 
IVEPGQVVGV GQTLAVLAED ESLEVEVFFT RGQ