Gene Maqu_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0293 
Symbol 
ID4654780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand+ 
Start bp338536 
End bp339156 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID639810249 
Producthypothetical protein 
Protein accessionYP_957586 
Protein GI120553235 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.545966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGA TCGTAATGGT GTTGGCGGGG GTCATGGCCA TGCCCCTCTG GGCTCAGGAC 
ATGCAGGCGG AACTGGCCCA AATCCAGCAA CGCTGGGCGC AGATCCAGTA TCAGTTGCCA 
GACGATGATA AGGAAAAGGC ATTTGAGTCA CTGGCCAAAG AGGCCGAGAC CTTTGTCGCT 
GATTATCCGG GCCGTGCCGA ACCGCTGATC TGGCAGGGGA TTGTACTCAG TACCTACGCC 
GGCGCCAAAG GCGGCCTGGG TGCGCTGGGG CTGGTGAAAG AGGCTCGGGC CTCCCTGGAA 
GCGGCCCTGA AGATCGCTCC GGAGGCGCTG GATGGCTCAG CCTATACCTC GCTGGGCAGC 
CTGTATTATC AGGTGCCGGG CTGGCCGCTG GGGTTCGGAG ATGATGAGAT GGCCCGGAAG 
TACCTGCAGA AATCGCTGGC AATTAACCCG GAAGGTATTG ATGCCAATTA CTTCTTTGGA 
GATTTTCTGG CCGAGCAGGA TGAGCCGCAA CGGGCCCGGG TCTATCTTGA AAAAGTATTA 
GCGGCCCCGT CGAGACCTGG TCGGGAAGTG GCGGATGCCG GCCGTCGAGC CGAAGCAAGG 
GCCCGCCTGG ATAGCCTTTA A
 
Protein sequence
MKWIVMVLAG VMAMPLWAQD MQAELAQIQQ RWAQIQYQLP DDDKEKAFES LAKEAETFVA 
DYPGRAEPLI WQGIVLSTYA GAKGGLGALG LVKEARASLE AALKIAPEAL DGSAYTSLGS 
LYYQVPGWPL GFGDDEMARK YLQKSLAINP EGIDANYFFG DFLAEQDEPQ RARVYLEKVL 
AAPSRPGREV ADAGRRAEAR ARLDSL