| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_6050 |
|---|
| Symbol | |
|---|
| ID | 4644026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 6460168 |
|---|
| End bp | 6461508 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639809515 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_956809 |
|---|
| Protein GI | 120406980 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3408] Glycogen debranching enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.117298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.89444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACG ACACCAGCTT CGCCCCGACC CAACTGGCCG CCCGAGCGGC CTACCTGCTG
CGGGGTAACG ACCTCGGCGT GATGACGACC GCCGCTCCTT TGCTGTACCC GCACATGTGG
AGCTGGGACG CCGCGTTCGT GGCGATCGGG CTGGCCCCGC TGTCGGTGGA ACGCGCCGTC
GTCGAGCTGG ACACCCTGCT GTCCGCGCAG TGGCGCAACG GCATGATCCC GCACATCGTC
TTCGCCAACG GAGTCGACGG GTACTTCCCC GGCCCGGCGC GGTGGGCCTG CTCGGCGCTG
TCCCCGGATG CGCCCCGCAC CCGCCACACG TCGGGGATCA CCCAACCTCC GGTGCACGCC
ATCGCGGTGC AGCGCATTCT CGACCACGCC CGCACCAGGG GGCGTTCCAC CCGGGCCGTG
GCCCAGGCGT TCCTGGACCG ACGCTGGAAC GATCTGGTGC GCTGGCACCG CTGGCTGGCC
GAGTGCCGGG ACCAGAACGA GCGGGGCCGG GTCACGCTGT ACCACGGCTG GGAGTCCGGC
ATGGACAACT CTCCGCGCTG GGATAGCGCG TACGCCAACG TGATTCCCGG TGACGTGCCC
GAATATCAGC GCGAGGACAA CACCATCGTC ACCGACGCCA GCCAGCGCCC CTCCGACATG
GAGTACGACC GGTACCTGTG GCTGTTGGAG GAGATGAAGG CGGCCCGCTA CGACGACCAA
TTGCTGTCCA AGGTAATGAG TTTCGCCGTG GAAGACGTAT TCGTCTCGGC GATTCTTGCG
GTGGCATGCC AGGTGCTGGC CGAGATCGGG GAGGACCACA AGCGGCCGAA CTCCGACGTC
AGGGATCTGT ACGCCTGGGC CGACAGGTTC CGGGCCGGCG TCATCGCCAC CACTGATGAA
AGAACCGGTG CGGCAAAGGA TTACGACGTC CGAGCGGAGA GGTGGATCGC GACCGAAACG
GCGGCGCAGT TCGCGCCGCT GTTGTGCGGT GGATTGCCCC ATGACCGGGA GCGGGCGCTG
CTCCGGCTGC TGGAGGGGCC GCGGTTCTGC GGACATCCCG ACCTCGCCTA CGCGTTGATC
CCGTCGACGT CGCCGGTGTC GCGGGACTTC CGTCCGCGGG AATACTGGCG CGGCCCGGTG
TGGCCGGTGA TGACCTGGCT GTTCGCGTGG TGTTTCGCGC GCCGAGGCTG GGCGGAGCGG
GCGGCGACGC TGCGCCGGGA GGGGCTGCGC CAGGCCAGCG ACGGCACCTT CGCCGAGTAC
TACGAGCCGT TCACCGGGGA ACCGCTGGGC AGCATGCAGC AGTCGTGGAC CGCCGCCGCG
GTGCTGGACT GGTTGGGCTG A
|
|---|
| Protein sequence | MPHDTSFAPT QLAARAAYLL RGNDLGVMTT AAPLLYPHMW SWDAAFVAIG LAPLSVERAV
VELDTLLSAQ WRNGMIPHIV FANGVDGYFP GPARWACSAL SPDAPRTRHT SGITQPPVHA
IAVQRILDHA RTRGRSTRAV AQAFLDRRWN DLVRWHRWLA ECRDQNERGR VTLYHGWESG
MDNSPRWDSA YANVIPGDVP EYQREDNTIV TDASQRPSDM EYDRYLWLLE EMKAARYDDQ
LLSKVMSFAV EDVFVSAILA VACQVLAEIG EDHKRPNSDV RDLYAWADRF RAGVIATTDE
RTGAAKDYDV RAERWIATET AAQFAPLLCG GLPHDRERAL LRLLEGPRFC GHPDLAYALI
PSTSPVSRDF RPREYWRGPV WPVMTWLFAW CFARRGWAER AATLRREGLR QASDGTFAEY
YEPFTGEPLG SMQQSWTAAA VLDWLG
|
|---|
| |