Gene Mvan_6000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_6000 
Symbol 
ID4646291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6398338 
End bp6399480 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID639809467 
Productradical SAM domain-containing protein 
Protein accessionYP_956761 
Protein GI120406932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGGCG ATTTCACGCC AGCACAGCAG CTTAAGTTCG CGCTGCTGGA TGAAGGGCTG 
GCGCTACACG GGTCGGCGTG GACCGCGTTG CGGGAGTTGA ATGGGACCCG GTCGCTTTCG
CCCCACGACT ATGCGTCGAC ATCCGGAGTC ATCCTCGAAC TCGACGACGA CGTGTGGGTC
AATGCGCCGA TCGAGGCCTT TAACCCTAAC TTCGTGACTC AGTCCCCGTA CCAGCTGCTG
TACGACAACG GATTCCGCGT CGAAGGACAG GGACTCGTCA GCAGGGCGAC GTTCTGGCCC
CAGCCCGCGT ACCACAGCAC GACGGGACCC TGGGGTCCGT GGAACAACTT CGTTGTGACG
CACGGTGACC GAGGCCGGTT ATCTCCCCTC CGCAGCTGTG CAATGACGTG CACTTTCTGC
AATATTCCCT ACGACGACGC GATCGACGTG TACTCGCTGA AGCCCGTGGA TGCACTGCTG
GCCGCCGCAC ACCTGGCGAT CGACGACCCG ATTCAACCAG CTCGGCACCT GCTCATCTCC
GGAGGAACGC CCAAGCCGAA GGACATCGGC TGGATGCGCG AGTTCTACGA GCGCATGTTG
ACCGAATTCC CCAACATCGA GCTCGACATC ATGATGGTTC CGCTGCCGGG CCTATTCGAT
CTACCGCGGC TGGCTGCGCT CGGATTGCAC GAACTGTCCA TCAACATCGA GCTGTTCAAC
CGAGATCTCA CTCGCGAGTT CGCTCGGCAG AAGTACAACC AGGGCTTGGC GCTGTATCTC
GACTTTATCG AAGCGGCGAC CACCGAATTG GGGGTCGGCA GGGCCCGTTC GATGCTGATG
GTGGGGCTGG AACCCGTCGA AGACACCTTG GCCGGTGTGC GTGCGATCGC CGAGCGCGGA
GGTACGCCGG TCTTGAGCCC ATTTCGGCCC GATCCGGCGA CACCGCTGCG TCAACTCAAA
CCGCCGTCTG CGGAGACGAT GATCGACACT TACCTTCGAG CACGCGACAT CACCGAGGAA
CACGGCGTAG CGCTTGGTCC CGACTGCCCG CCATGCAGCC ACAATACGTT GAACTTCGCC
ACCGATTCCG CAGGTGCGCT GCACTATCAA CGTGATCGGC CTCGCATGTT GGGCGCCTGC
TGA
 
Protein sequence
MDGDFTPAQQ LKFALLDEGL ALHGSAWTAL RELNGTRSLS PHDYASTSGV ILELDDDVWV 
NAPIEAFNPN FVTQSPYQLL YDNGFRVEGQ GLVSRATFWP QPAYHSTTGP WGPWNNFVVT
HGDRGRLSPL RSCAMTCTFC NIPYDDAIDV YSLKPVDALL AAAHLAIDDP IQPARHLLIS
GGTPKPKDIG WMREFYERML TEFPNIELDI MMVPLPGLFD LPRLAALGLH ELSINIELFN
RDLTREFARQ KYNQGLALYL DFIEAATTEL GVGRARSMLM VGLEPVEDTL AGVRAIAERG
GTPVLSPFRP DPATPLRQLK PPSAETMIDT YLRARDITEE HGVALGPDCP PCSHNTLNFA
TDSAGALHYQ RDRPRMLGAC