Gene Mvan_5838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5838 
Symbol 
ID4643420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6223876 
End bp6225465 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content71% 
IMG OID639809314 
Producthypothetical protein 
Protein accessionYP_956609 
Protein GI120406780 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.245056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCGG ATCGGTCAGA CGGCATGGCT CGACGCCGGC GCGCGTTGCA CTTCGCGCTG 
AAGGGACGCC GCGATCCCGC GTCGGGCGCC GGGCAGCGGC GGCGCACTTC CGGCAGGCTG
AGCGAACGAC ACACCCGCAA GGTCCTCGAT CTGACCATCC GGCTCGCCGA GGTGATGCTG
TCATCCGGGT CCGGCACCGC AGACGTCGTC GCAACCGCTC AGGATGTGGC GCAGGCCTAC
CAGCTCACCG ACTGCGTGGT CGACGTCTTC GTCACCACCA TCTTCGTGTC GGCGCTGCCC
ACGGCGGACA GCCCTCCGGT CACCATCGTG CGGGCAGTGC AGGCGCGCTC GACCGACTAC
ACGCGGCTCG CCGACCTTGA TCGGTTGGTC CGGCGGATCA CCTCCGGCGG GGTGTCGGTG
GATGAGGCGC ACGAGGCGAT GGACGAGTTG AGCGAACAGC CGCACCCCTA CCCGCGCTGG
ATCGCGACCG CAGGATGGGC CGGCTTCGCC CTCGGCATCG CGATGTTGCT CGGCGGCACC
TGGCTGACCT GCATCCTGGC CGCGGGAACC TCGGTCTTGA TCGACCGCAG CGGCCGGTTG
TTGAACCGCG TCGGCACACC GATGTTCTTT CAGCAGGCGG CGGGGGCTTC GATCGCGACG
CTGGTCGCCG TCGCCGCCTT TCTGTTCGCC GGGCAGGGTC CGACCACGCT GGTCGCCACC
GGGATCGTGA TGCTGCTGGC CGGGATGACC CTGGTGGGCT CGGTGCAGGA CGCGCTGACC
GGCTACATGC TCACCGCGGT GGCCCGGCTC GGCGACGTGC TGTTCCTGAC GCTCGGCATC
GTCGTGGGCA TCCTCGCCGG CCTGCAGATC GCCGCCCTGG CCGGGATCCA GATCCAGCTG
CGCGTCGACG CGACGGAGTA CTTCGTGGTG CCCACCACGC CCAGACAGAT CGTCGTCGCT
GTCTCCGGCG CGGCGCTGGC GGGTGCCTGC CTTGTCATCG CCAGCTACGC CAAATGGCGA
TCCGTGCTCA CCGCCGGAGT CGCTGCCGGC CTGGCCGAAG CCGTGTTGAT CGGCCTCGGC
CGCGCCGGGG TCGGCCAGGT CGTCGCGACC GGCACCGCAG CGGTGGGTGT GGGCCTGCTG
GCCACCTTGA TCTCGATCCG GCGACAGGCG CCCGCGCTGG TCACGGCGAC CGCGGGGATC
ACCCCGATGC TGCCGGGCAT GGCCGTCTTC CGTGCGGTCT TCTACTTCGC CGTGGAGCGG
GATTTCGCCG CGGGCATGGC ACAGGCGCTG GCCGCCGCGG CCACCGCGCT CGCGATCGGG
GCCGGCGTCG TCATGGGCGA GCTGGCCGGC TCGCCGCTCC GATACCGCGC CGGCCGGATC
AGCGACTTCC TGCGGGTGGA AGGCCCGCCC GGGCTGCGAC GAGCCGTGGG AAACGTGGTG
GCACTCCGGC CCGCCGCAGA TCAGCAATCG AGCCGCAGCC CACATCAGCG GTCGTGGAGC
GTCGCGCTGG AACCGGAGTT GTCCGAGGTC GCGACCGAGG CCAACGGGGA AGATCCCGCC
CCGGAAAGAG ACGCCACCGG CGAGCGATGA
 
Protein sequence
MGSDRSDGMA RRRRALHFAL KGRRDPASGA GQRRRTSGRL SERHTRKVLD LTIRLAEVML 
SSGSGTADVV ATAQDVAQAY QLTDCVVDVF VTTIFVSALP TADSPPVTIV RAVQARSTDY
TRLADLDRLV RRITSGGVSV DEAHEAMDEL SEQPHPYPRW IATAGWAGFA LGIAMLLGGT
WLTCILAAGT SVLIDRSGRL LNRVGTPMFF QQAAGASIAT LVAVAAFLFA GQGPTTLVAT
GIVMLLAGMT LVGSVQDALT GYMLTAVARL GDVLFLTLGI VVGILAGLQI AALAGIQIQL
RVDATEYFVV PTTPRQIVVA VSGAALAGAC LVIASYAKWR SVLTAGVAAG LAEAVLIGLG
RAGVGQVVAT GTAAVGVGLL ATLISIRRQA PALVTATAGI TPMLPGMAVF RAVFYFAVER
DFAAGMAQAL AAAATALAIG AGVVMGELAG SPLRYRAGRI SDFLRVEGPP GLRRAVGNVV
ALRPAADQQS SRSPHQRSWS VALEPELSEV ATEANGEDPA PERDATGER