Gene Mvan_5488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5488 
Symbol 
ID4648576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5871901 
End bp5873022 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content71% 
IMG OID639808963 
Productcobalamin synthesis CobW domain-containing protein 
Protein accessionYP_956263 
Protein GI120406434 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.133332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.137525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACTC CAGTCGTGGT CGTGGCCGGA CAGAGCGACA CCGACGGCAT CACCGGTGTC 
CTCCTGGACG GTGCCGGAAC GGTCCTGGTG GAGCACCGGT TCGACGGGCA TGTGGTGCAC
CGCAGCACGA CGGTGGTGCA GGGCGGGCTG CTCGACACCG CAGACGAGGT GCTGGAGCTG
ACGAACTGCT GCCTGTCCTG CACCGTGCGC GAGGACCTGC TCTCGCACCT GCGCCGGCTG
CACCGCAGAC CCGACGTCAA ACGCATCGCC GTGCGGCTCG GTCCGTGGAT GGAACCCGAA
CAGGTCTGCT TCGCCATCAC CCGGTTGCCC GCGGCACGCG ACGTGGCGAT CGCGGCCGTC
GTCACCGCCG TCGACACCTC GACGTGGTTG CGCCAGGCGC TCGGCGACGA CGAACTCGAC
GACGGACGGA CCGTCGCCCA GGTGGTCGTC GGCCAGGTCG AGTTCGCCGA CGTCGTCGTC
CTCACCGGCC CCGACCCCGA CGTCGTTGCC GTCACCCGCA GGCTGGCGCC CAGGGCTCGC
GTCGCCGTCG GCGCGCAACG GCTCGGCGTC GCGCTCGCCG ATCTGGACCC CGATGCGCGC
CGCGGCCGCA GCGACGATCC ACACGCCTCG CTGTTGTCCG GTCAACCCCC GCTCGAGGCG
GCAGGACCGG TCCGCCTTGT CGAGTTCCAA TCCCGCCGCC CGTTTCATCC CCTGCGCCTG
CACGCCGCCG TCGATCTGCT GCTGGACGGC GTGATCCGCA GCCGGGGCCG GTTGTGGCTG
GCCAACCGTC CGGGCCATGC CCTGTGGCTG GAGACGGCCG GCGGCGGACT GCGTGTCACG
CGGACGGGAA AGTGGCTGGC CGCCATGACT TCCCGTGAGA TCGCCTACGT CGGACCGGAG
CGGCGGGCGA TGGCGGACCT GATCTGGGGG TATCCGCACG GAGATCGGCA CACGTCGATG
ACGGTCCTGG TGTGCGGGGC CGAACCGGCC GACATCATCG ATGCGTTGCA GGGCGCGCTG
CTCACCGACG CCGAGATGCA GCGCCCGCAG GACTGGGGCC GCTACGAGGA CCCGTTCCAC
GACACGCTCG AAGGGGATGC CGACGAGGCC CGGCTGGCAT GA
 
Protein sequence
MRTPVVVVAG QSDTDGITGV LLDGAGTVLV EHRFDGHVVH RSTTVVQGGL LDTADEVLEL 
TNCCLSCTVR EDLLSHLRRL HRRPDVKRIA VRLGPWMEPE QVCFAITRLP AARDVAIAAV
VTAVDTSTWL RQALGDDELD DGRTVAQVVV GQVEFADVVV LTGPDPDVVA VTRRLAPRAR
VAVGAQRLGV ALADLDPDAR RGRSDDPHAS LLSGQPPLEA AGPVRLVEFQ SRRPFHPLRL
HAAVDLLLDG VIRSRGRLWL ANRPGHALWL ETAGGGLRVT RTGKWLAAMT SREIAYVGPE
RRAMADLIWG YPHGDRHTSM TVLVCGAEPA DIIDALQGAL LTDAEMQRPQ DWGRYEDPFH
DTLEGDADEA RLA