Gene Mvan_5454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5454 
Symbol 
ID4644567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5835300 
End bp5836439 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content72% 
IMG OID639808930 
Producthypothetical protein 
Protein accessionYP_956230 
Protein GI120406401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.447732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CTGTCGGGGC GACCATCACC GACCGGTGGC GCGGACTGCG CTGGGCGCTG 
GCCGCGGTCG TCGCGATCGT CGCCGTCGCC GCGCTGACCA CCTGGCTGAC CGCGCCGCGC
CCGGGTGGGC ATCTGGATCC GACCTCCACC TCGTCCGACG GTGTGCTCGC GTTGATGACC
CTGCTGCGCG AACACGGCGT CACCGTCGTC GAGGCCGCTT CGATCGCCGA TGTCGAACGC
GAGGCGCGCG AGGACACCCT GGTTGTCGCG GCGCAGACCT ACCATCTGTA CGACGACGAC
CAGCTGCGCC GGCTCGCCGC CGCACCCGGG GACCGGCTGC TCATCGCTCC GATCGGCAAG
ACCCGCGAGG AGCTGGCCCC CGAGTTGCGC CGTGCCGAGA CGACGGAATT CGGCGGGCTG
GCCCCCGATT GCGATCTGCG GGAAGCCAAC CGGGCCGGCA CCGTGCAGTT CGGCATCGCC
GAGACCTACG AAGCGCAGGG TTCGACCGCG GTGACCCGCT GCTACGACGG CGTGCTGGCG
CGCTACACCG ACGACGGACG CACCATCACC GTGGTGGGCA GTGAACAGTT CCTGATGAAC
GCGGGCCTGG CCGAGGAAGG CAACGCCGCG CTGGCGATGA ACCTCGCGGG GACACACCCG
CGGATGATCT GGTACGCGCC GCAGCGCAGC GAGGGCGGCG AGTCCGGCGG CGCCGCGTCG
CTCACGGATC TCATTCCCGC ACAGGTGTAT TGGATGGTGC TACAGCTGAT CCTGGCGGTG
GCACTGCTGG CGTGGTGGAA GGGACGGCGG GTCGGCCCGC TGGTGGCCGA AGCACTGCCC
GTGGTGGTGC GTGCCTCGGA GACCGCCGAG GGGCGCGGCC GGCTGTACCG GTCCCGGCGC
GCCAGGGACG TCGCCGCCGA ATCGCTGCGC ACCGCGACCC GCCAGCGCAT GCTGCCCCGT
CTCGGCCTGA CCCCCGGCGC GCCGCCGGAG GCGGTCAGCC AGGCGGTCGC GGCCCGGTGC
GGCCTGGACC CGCAGACCGT CGCCCATACT CTGTACGGGC AGCCCCCGGA CACCGACGCC
GATCTGGTCA CCCTGGCCCG CGCGCTCGAC GACATCGAAA GGCAGGTCGC ACAGTCGTGA
 
Protein sequence
MSTAVGATIT DRWRGLRWAL AAVVAIVAVA ALTTWLTAPR PGGHLDPTST SSDGVLALMT 
LLREHGVTVV EAASIADVER EAREDTLVVA AQTYHLYDDD QLRRLAAAPG DRLLIAPIGK
TREELAPELR RAETTEFGGL APDCDLREAN RAGTVQFGIA ETYEAQGSTA VTRCYDGVLA
RYTDDGRTIT VVGSEQFLMN AGLAEEGNAA LAMNLAGTHP RMIWYAPQRS EGGESGGAAS
LTDLIPAQVY WMVLQLILAV ALLAWWKGRR VGPLVAEALP VVVRASETAE GRGRLYRSRR
ARDVAAESLR TATRQRMLPR LGLTPGAPPE AVSQAVAARC GLDPQTVAHT LYGQPPDTDA
DLVTLARALD DIERQVAQS