| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5229 |
|---|
| Symbol | |
|---|
| ID | 4645244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5598893 |
|---|
| End bp | 5600056 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639808704 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_956006 |
|---|
| Protein GI | 120406177 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.340919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.127707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTCCGG ATAGAACGCG TTCTAGTTTT GGGGCTGTGT TCACGCAGCC GCTGGCCGAG
GCCATCGCCG AGGCCGAGAA ACTCGTCGCC GCCGCCCCGT TCATCGAATC CGAGGCGGAC
CTGCTCGAGG GGCTGCAGTA TCTGGCCGGC TGCGTCGCGG CGTGCACGCA CGTCGCGTTC
GACTACGACC GCGACCACCC CTTCCTGCAC AGCGGCACCG GCCCGTTTAC CAAGATGGGT
CTCGACAACC CCGACACCAT GTACTTCGGC ACCCGTGTGC AGCCCGGCCA CGAGTACGTG
GTCACCGGCA GGCGCGGCAC CACCACCGAC GTCAGCTTCC AGCTTCTCGG CGGCGAATAC
ACCGACGAGG TGGTCCCGGA CAGCGAGACG GCGTTCGACG ACCGCAAGCT CGACATCGCC
GCCGACGGCA CCTTCGAATG GCGGTTCACC CCGAAGGTGC CGTCCCAGCT CGTCATCCGC
GAGGTCTACA ACGACTGGTC CGCCCAGCGC GGCACCTTCG CGATCGCGCG CACCGACACC
GCGGGCACCG CACCGCCGCC GCTGACGCGC GAGCTCATCG AGAAGCGCTA CGCCGTCGCC
GGGAAGCAGC TGGTGCAGCG CGTCAAGACG TGGTTGCAGT TTCCTCAGTG GTTCTACAAC
GACACCCAGC CGAACTCGAT GGTGGCGCCC CGGCTCACCC CCGGCGGGCT GGCCACCCAG
TACTCGTCGG CGGGACAGTT CGATCTCGCC GAGGATCAGG CGCTGATCAT CACGCTTCCG
GTCACCGACG CGCCCTACCT CGGGTTCCAG CTGGGCAGCC TCTGGTACAT CTCGCTGGAC
TACATCAACC ACCAGACGTC GTTGAACGGC ACTCAGGCGC AGGCGGACCC GGACGGCATG
ATCCGTATCG TCGTCGCCGA CCGCAATCCC GGCGTGACGA ACTGGGTGGA GACACTCGGG
CACCGCAAGG GCTTCCTGCA GTTCCGCTGG CAGCGGGTGT CGCGTGAGCT GACGCCCGCC
GACGGGCCGA CCGTGGAGCT GGTCGACATC GACAAGGTCG CCGCGGCACT GCCGTACTAC
GAATCCAACA CGATCTCGGA ACAGGACTGG CGGGCGCGGA TAGCGCTGCG CCAGAAGCAG
ATCGGCGAAA GAATGGTGGG TTGA
|
|---|
| Protein sequence | MTPDRTRSSF GAVFTQPLAE AIAEAEKLVA AAPFIESEAD LLEGLQYLAG CVAACTHVAF
DYDRDHPFLH SGTGPFTKMG LDNPDTMYFG TRVQPGHEYV VTGRRGTTTD VSFQLLGGEY
TDEVVPDSET AFDDRKLDIA ADGTFEWRFT PKVPSQLVIR EVYNDWSAQR GTFAIARTDT
AGTAPPPLTR ELIEKRYAVA GKQLVQRVKT WLQFPQWFYN DTQPNSMVAP RLTPGGLATQ
YSSAGQFDLA EDQALIITLP VTDAPYLGFQ LGSLWYISLD YINHQTSLNG TQAQADPDGM
IRIVVADRNP GVTNWVETLG HRKGFLQFRW QRVSRELTPA DGPTVELVDI DKVAAALPYY
ESNTISEQDW RARIALRQKQ IGERMVG
|
|---|
| |