Gene Mvan_5180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5180 
Symbol 
ID4645697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5543953 
End bp5546031 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content66% 
IMG OID639808655 
Producthypothetical protein 
Protein accessionYP_955957 
Protein GI120406128 
COG category[R] General function prediction only 
COG ID[COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.357825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCGG CAGCATACGT CGGTCGGGTA GGCGGTCTCG CGGTCGCGCT GGGCGTCGGA 
ACAGCAGTCT TTGCAGGCCA GGGTGTGGCC TGGGCCGACG ACACCGAGTC GTCGACCAAC
GGCGCCTCGA GCGCAGCAAC GTCGGACAGC GTCCAGACGG ACACCACCTC GGACACCGTC
GACACGCCGG AAGCCGACAC TGAAGACGAG ACCGAGCCCG ACCCGGAACC CGAAGACCAG
GCCGAGCCCG ACCCGGAACC CGAAGACCAG GCCGAGCCCG ACCCGGAACC GGAGCCGGAG
CCGCAGGACG AGCCAGATCC AGACCAGGAC CAGGACCAGG ACGCCGACGA TTCCGAGGGC
GCGGACGCCG ACCAGGAGCC CCCGAAAGCC ACTGAGACGA ACACCGAGAC GTCGACCAAG
CCCGAGCCCG AGCCCGAGCC CGAGCCCGAG CCCACCGAGA AGACCACCGC GACGGTGACC
GACGACGGAT CCGACGATCC GGCCGTGCCA CCGCAGGAAC CCAAGAAAGT CGCCGTTTTC
GCCACTGCGA CCTCGCTGGC GGAGTCGAGC CCGAAGACAC TCTCCCCGAA GGTCGCCGCG
CTGCTGACCA CCGAGCAGGA CGAGGCCGCG GCGGCGAAGA AGCCGAACCT GATCACCGCG
GTCGTCAACG TCGTCACCAG CATGCTGGAC TGGGCCCGTC AGAAGGCCGA CGCCAAACCC
GGCGATGCCC CGCAGCCCCC GTTCCTGTGG GCGTTGCTGT CCTTCGCGCG GCGCGAGCTC
GACAACCTGT TCGCCGCGCG CAGCACCACC AACGCCCCGC GCACCACCTC GGTGACGCCG
ACCAGCCTGG CGCTGACCGA CGACGCGACC ACCGCGGCCC TGATCCCGTC CTACTCGCCG
TGGCTCAACC CGCAGGTCAG CCCGTCGACC CGATTCGTCA GCTGGGTCAC CGGCAAGTAC
GTCTACCTCG ACGACGACAC GCTGGCCAAC ACCCTGGCCC GCTTCTCGGT GTACGGCACC
GATGTCGGCG TCATGTGGGA CAACGGCATG GTCGACGATC CGTCCACCCC CGACATCAAC
GAGCACCAGA TCCTGATCGC GGTCGGCGAC ACTTTCGGCG CCAAGGGCAT GACCGGCAGG
CATATCTACA ACACACTGTT CCGCAGCTCC GACACCGACC TGTCCGACGG CATGACCATC
CCGGACGGAG AGTGGTTCAA CGGCAACATG TTCGGTGGCG CGCCGCTCGA CGGCCCGACC
CAGGCGCGGC CGATCATCAA CCGGCCGTCC TGGCTGCCGA ACTCGGTCAC CCTGATCCCG
ACCGCCGGTG TCTCGCTGCC CACCGAGGTC ACTGAGGACA CGCCGTTCGG CACCATCCAG
TACGTCAGCT TCATGTCGGT GTCGAACTGG GGCTCGTCAG GCCGGTGGAC CACCAATTAC
TCGGCCATCG CGTACTCGAC CGACAACGGC GAGAACTTCA AGGTGGCGCC CGAAAGTGTG
CGCTACAACT CGATTTTCAG CGGAAATCGC AACTTCCAGC AGTCGGCGTT CGTCAAGGGC
GACGACGGCT ACGTCTACGT CTACGGCACC CCCAACGGCC GACAGGGCGC CGCCTACGTC
GCGCGTGTCA ACAACGAGAA CATCCTCGAC GTGTCCGAGT ACGAGTACTA CAAGGCGGCC
TCCACAGGGT GGTTCGGAAG CTCGGAAGCC AGGTGGGTCA AGGGCAATCC GTCGTCCGCC
TCGGCCGTCA TCGGCAAGAC CGGCGGTGCG TGCGGATCCA CCGAACCCGG CTACACGGTC
AGCGAGATGT CGGTGCAGTA CAACGAGTAT CTGCAGAAGT ACATCGTGCT CTACGGCGAC
CAGTTCAACA ACATCGTGAT GCGCACCTCG GACACCCCTG AGGGTGCCTG GTCGGATGCG
ACGGTGTTGA TGGGCCAGCA GAGCGGCGGG ATCTACGCGC CGATGCTGCA TCCGTGGTCA
CCCTCGACCC AGGGCACCGG CTCCGATCTG TACTGGAACC TGTCGCTGTG GTCGGACTAC
AACGTCATGC TGATGAAGAC CGACCTGACG AAGCTGTAA
 
Protein sequence
MGAAAYVGRV GGLAVALGVG TAVFAGQGVA WADDTESSTN GASSAATSDS VQTDTTSDTV 
DTPEADTEDE TEPDPEPEDQ AEPDPEPEDQ AEPDPEPEPE PQDEPDPDQD QDQDADDSEG
ADADQEPPKA TETNTETSTK PEPEPEPEPE PTEKTTATVT DDGSDDPAVP PQEPKKVAVF
ATATSLAESS PKTLSPKVAA LLTTEQDEAA AAKKPNLITA VVNVVTSMLD WARQKADAKP
GDAPQPPFLW ALLSFARREL DNLFAARSTT NAPRTTSVTP TSLALTDDAT TAALIPSYSP
WLNPQVSPST RFVSWVTGKY VYLDDDTLAN TLARFSVYGT DVGVMWDNGM VDDPSTPDIN
EHQILIAVGD TFGAKGMTGR HIYNTLFRSS DTDLSDGMTI PDGEWFNGNM FGGAPLDGPT
QARPIINRPS WLPNSVTLIP TAGVSLPTEV TEDTPFGTIQ YVSFMSVSNW GSSGRWTTNY
SAIAYSTDNG ENFKVAPESV RYNSIFSGNR NFQQSAFVKG DDGYVYVYGT PNGRQGAAYV
ARVNNENILD VSEYEYYKAA STGWFGSSEA RWVKGNPSSA SAVIGKTGGA CGSTEPGYTV
SEMSVQYNEY LQKYIVLYGD QFNNIVMRTS DTPEGAWSDA TVLMGQQSGG IYAPMLHPWS
PSTQGTGSDL YWNLSLWSDY NVMLMKTDLT KL