Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5158 |
Symbol | |
ID | 4647442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 5523165 |
End bp | 5523761 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639808632 |
Product | TetR family transcriptional regulator |
Protein accession | YP_955935 |
Protein GI | 120406106 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.420731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCAACG ATGCTGTTGC CCAGCTCACC GAAGAGCCGG GGAACCCGCC ACGTAACCGC CGGCAGGAGG AGACCTTTCG CAAGGTCCTC GCCGCCGGGC TGGAGATGCT GCGCGAGTCG TCGTACGCCG ACCTGACGGT GCGGGCGGTG GCGGCACGGG CCAAGGTGGC CCCGGCAACC GCCTACACCT ACTTCTCGTC GAAGAACCAT CTGATCGCCG AGATCTACCT GAGCCTGATA ACGAAGGTCG ACTACTTCAC CGACGTCAAC GACAGCACCG CCGTCCGCGT GGAGAAGACT TTGCGCAGCA TGGCCCTGAT GATCGCCGAC GAGCCCGAGG TCGCCGCGGC CTGCACCACC GCGCTGCTGT CGGGCAACGA CGCCGCGGTA CGCACCGTGC GCGAACGCAT AGGTGCCGAG ATACACCGGC GCATCCGCGC GGCGGTCGGC CCCGATCCCG ATCCCCGCAC GCTGGCCGCA CTGGAAATGA CGTTCTTCGG CGCTCTGGTC AATGCCGGCA GCGGCGCCTT CACCTACCAC CAGATCGCCG ACCGCTTGAG TTACGTGGTC GGCCTCATCG TCGGAGACGA TAAATGA
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Protein sequence | MSNDAVAQLT EEPGNPPRNR RQEETFRKVL AAGLEMLRES SYADLTVRAV AARAKVAPAT AYTYFSSKNH LIAEIYLSLI TKVDYFTDVN DSTAVRVEKT LRSMALMIAD EPEVAAACTT ALLSGNDAAV RTVRERIGAE IHRRIRAAVG PDPDPRTLAA LEMTFFGALV NAGSGAFTYH QIADRLSYVV GLIVGDDK
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