Gene Mvan_5118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5118 
Symbol 
ID4647555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5479569 
End bp5481290 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content69% 
IMG OID639808592 
Producthypothetical protein 
Protein accessionYP_955895 
Protein GI120406066 
COG category[S] Function unknown 
COG ID[COG4425] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0678631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.764833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGA GCGACACCGA GGAACGCCCC GCCTACCTGT GGGCGTGGCG ACTGCTACGG 
CTGGACTTCA TCGGTGTCGC CTTCGGGGCG CTGTTCTTCT GCCTGTCGCT CACCCCCTCG
CTGCTTCCCC GGGACTGGCT GTTCCAGGGC CTGATCGGCG GTCTCAACGC CGCCATCGGC
TACGGCATCG GCGTGTTCCT TGCGAAGATT CTGCGCCGAT TCGTGCTCGC GAACCGGCGG
TGGTGGCCAC CGCCTCCGAA GGTGCTCTAC GCGTCGAAGG CGGTCATCGT GGTGGTCGCC
GCGTCCGCCT GTGTGCTGAT GGTGATTCCG GCGGCGGCGT GGCAGCGCCA GGTCTCCGCG
CTGATGGGCA TGGACGGCCC GAGCACGACG AGCTATTTTC GGACGCTGCT GCTTGCCGCG
GTGGTCGGCG GCGTCTGCGT CGCCACGGCG CGGGTGCTGC TCGAGTTCAT CAAGACGTTG
GCGCGGGTGC TGATCCGGCG CTGGCGACTG TCCGACGAAA TCGCGCTGTT CGTCGGCACG
GCCGTGGTGG TGGTGCTGGT GATCACGTTG GTCAACGGTG TGCTGTTCCG CGGCTTCCTG
GCCGGCGCCA ACGCGGTGTT CCAGCCCCAG AACGCCACCA CCGCCGAAGG CGTTGTCCAG
CCTGCCCTTC CCGAAAAGTC AGGCAGCCCA GACTCTTTCG CGCAATGGGA CTCCCTGGGC
TTCCAGGGGC GCAGCTTCGT CGCCGGCGGG CTGAACGCCG ATGAGCTCGC CCGCATCAAC
GGCAGACCCG CCAAGGAGCC GGTCCGCGTG TACGTCGGAT TGCAGACCGC CGACACCGAC
GAAGGGCGGA TGGCGGTGCT GCTTAGTGAA CTGGAACGCA CCGGGGCCTT CGACCGCGAG
GTGCTCGTCA TCGCACCCAC CACGGGGACG GGGTGGATCA ACCCGATCGC GGCCCGGTCG
ATAGAGATGA TGTACAACGG CGACACCGCG ATCGTCGGAT CGCAATATTC GTTTCTGCCC
AGCTGGATCT CGTTTCTCGG CGACCAAGAG AAATCCATGA AGTCGGGGCG GTCGATGATC
GACGCCGTCC ACGAACGGTG GGCCAAGCGG CCGCCGGACC GGCGGCCCCG GCTGCTGCTC
TACGGGGAGA GCCTGGGCTC GATGGCGGGG CAGGGCGCCT TCGACTGGCT CCCGGACATC
CCGCGGATGG GGTTCTCGTC GGTGCTGTGG GTGGGCCCAC CCAACGCCAG CCCACTGTGG
CGCGGCATCA CCGCGCGCCG TGACCCCGGC ACGCCCGAGG TCTTACCGCG CTACGACAAC
GGCCGCACCG TGCGGTTCTC GCAGGGCAAC AACGCCGCGC AGATCGCCGC AGACACCGCG
GCGCCGTGGG ACGGCACCCG GGTGCTGTTC CTGCAGCACC CGTCCGACCC GATCGTCTGG
TTGTCCCAAG AGCTGTTGTT CACCCGCCCC AACTGGCTTT CCGAGCCGCC GGGGCCCGAC
CGCACCGCGT CGATGCGGTG GTACCCGATC ATCACGTTCT GGCAGGTGGC CGCCGACATG
ACCAACGCGG TATCGGTGCC GCCCGGACAC GGCCACAACT ACAACGATTT CATCCTCGAC
GGCTGGGCCG GCGTCGCCCC GCCGCGCGGC TGGACCCAGG AAGACACCGA GCGGATCCGG
CTCGCGCTCG AAGAGGCCGG GTCCGAGGGC GGCGGGTACT AG
 
Protein sequence
MTASDTEERP AYLWAWRLLR LDFIGVAFGA LFFCLSLTPS LLPRDWLFQG LIGGLNAAIG 
YGIGVFLAKI LRRFVLANRR WWPPPPKVLY ASKAVIVVVA ASACVLMVIP AAAWQRQVSA
LMGMDGPSTT SYFRTLLLAA VVGGVCVATA RVLLEFIKTL ARVLIRRWRL SDEIALFVGT
AVVVVLVITL VNGVLFRGFL AGANAVFQPQ NATTAEGVVQ PALPEKSGSP DSFAQWDSLG
FQGRSFVAGG LNADELARIN GRPAKEPVRV YVGLQTADTD EGRMAVLLSE LERTGAFDRE
VLVIAPTTGT GWINPIAARS IEMMYNGDTA IVGSQYSFLP SWISFLGDQE KSMKSGRSMI
DAVHERWAKR PPDRRPRLLL YGESLGSMAG QGAFDWLPDI PRMGFSSVLW VGPPNASPLW
RGITARRDPG TPEVLPRYDN GRTVRFSQGN NAAQIAADTA APWDGTRVLF LQHPSDPIVW
LSQELLFTRP NWLSEPPGPD RTASMRWYPI ITFWQVAADM TNAVSVPPGH GHNYNDFILD
GWAGVAPPRG WTQEDTERIR LALEEAGSEG GGY