| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5108 |
|---|
| Symbol | |
|---|
| ID | 4647545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5471174 |
|---|
| End bp | 5472055 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639808582 |
|---|
| Product | 4-amino-4-deoxychorismate lyase |
|---|
| Protein accession | YP_955885 |
|---|
| Protein GI | 120406056 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC ATCCGGGCGT CGTCGTCACC CTCGACGGGC AGCTGCACGA TCCCGATGCC
CCGCTGCTGT ACGCCGACGA CCTCGCGGCG GTGCGCGGTG ACGGGATCTT CGAGACGCTT
CTGATCCGGG GCGGCCGCCC GTGTCTGCTC GACGCCCACC TGGGCCGGCT GGCGCACTCC
GCGCGACAGG TCGATCTGCC GCCACCGGAC GCCGCGCGTT GGCATGCGGC GGTGGGCATC
GCCGTCGACA GCTGGCTGCG CACAGGCGGC GACGAAGGGG TGCTGCGGCT GGTTTACAGC
CGTGGCAGGG AGCACGGCTC GGACCCCACC GCGTACGCCA CAATCGGCTC CGTGCCCGCG
CGGGTCGCCG ACGTCCGGCG CAACGGCCTG GCGGCGCTGA CCCTGCAACG CAGCCTGCCC
GCCGAAGGCG TCGACGCGAT GCCGTGGCTG CTGGCGGGTG CCAAGACACT GTCGTATGCG
GTCAACATGG CGGCGCTGCG GCACGCCGAG CGCCACGGCG CCGGTGACGT CATCTTCATC
AGCACCGAGG GGCACATCCT GGAGGGGCCG CGCTCCACCG TGGTCATCGC CACGTCGTCC
CCCGACGGGC GGACGTGCCT GCTCACCCCG CCACCCTGGT ATCCGATCTT GCGTGGCACC
ACCCAGCAGG CGCTGTTCGA ATTGGCGCGC AACAAGGGTT ATGACTGCGA CTACCAGGCC
CTCACGCCCG CTGATCTGAT TGCCGCACAA GGTGTTTGGC TGGTATCCAG CATCACGCTG
GCCGCGCGTG TGCACACCCT CGACGGTAAC CCGCTCGCCG CTGCGCCTCT CTCGGACGAG
ATCGCCGCGC TCGTCGACGC TGCGATCCTC TGCGATCGCT GA
|
|---|
| Protein sequence | MADHPGVVVT LDGQLHDPDA PLLYADDLAA VRGDGIFETL LIRGGRPCLL DAHLGRLAHS
ARQVDLPPPD AARWHAAVGI AVDSWLRTGG DEGVLRLVYS RGREHGSDPT AYATIGSVPA
RVADVRRNGL AALTLQRSLP AEGVDAMPWL LAGAKTLSYA VNMAALRHAE RHGAGDVIFI
STEGHILEGP RSTVVIATSS PDGRTCLLTP PPWYPILRGT TQQALFELAR NKGYDCDYQA
LTPADLIAAQ GVWLVSSITL AARVHTLDGN PLAAAPLSDE IAALVDAAIL CDR
|
|---|
| |