Gene Mvan_5093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5093 
Symbol 
ID4644145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5459686 
End bp5460363 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID639808567 
Productprotein tyrosine phosphatase 
Protein accessionYP_955870 
Protein GI120406041 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTG AGATAACCGG CACCACCGAG AAGCGGGCCG CGATATTCGC GGCCCTCGCC 
GATCCTTCGC GACTGGCCAT CGTCGATCAT CTGCTGCTGG CCGATGCCTC TCCGTCGGAG
TTACGCGCGG TGCTGGGCAT ACAGTCGAAC CTGCTCGCCC ACCACCTCGG CGTCCTCAAG
ACCGCCGGCC TCGTCCGTCA GACCCGGTCG GAGGCCGACC GCCGACGGAC GTATCTGCAA
CTCGACCACC AAGCCCTGGA GTCGCTCGTC CCCGCCACCG GACGGAAAGC GACCCGCGTC
TTGTTCGTCT GCACCCAGAA CTCTGCACGC AGCCAACTCG CCGCCGCCAT CTGGAACCGG
CGCAGCGAAC TGCCCGCCGC TTCAGCGGGC ACCCATCCCG CCTCCGGCGT GCACCCCGGA
GCCGTTGCCG CCGCACGCCG CCACAAGCTC CACCTTCGAC CCCACACCCC GCGCTATCTC
GGCGACGTCT TGGGCCCGGG CGACCTGGTC ATCGCGGTCT GCGACAACGC CCATGAGGAG
CTACCCGTCG AACTGCCTCG CCTGCACTGG TCGGTCCCCG ACCCAGTGCG GACTGCGCAG
GCCGAGGCAT TCGATGCCGC GGTGGACGAC CTCACCGACC GAATCGAACA CCTCGTCCCC
CACCTGAAGT CCGCCTGA
 
Protein sequence
MSIEITGTTE KRAAIFAALA DPSRLAIVDH LLLADASPSE LRAVLGIQSN LLAHHLGVLK 
TAGLVRQTRS EADRRRTYLQ LDHQALESLV PATGRKATRV LFVCTQNSAR SQLAAAIWNR
RSELPAASAG THPASGVHPG AVAAARRHKL HLRPHTPRYL GDVLGPGDLV IAVCDNAHEE
LPVELPRLHW SVPDPVRTAQ AEAFDAAVDD LTDRIEHLVP HLKSA