Gene Mvan_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5020 
Symbol 
ID4644630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5370126 
End bp5370545 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID639808491 
ProductMarR family transcriptional regulator 
Protein accessionYP_955798 
Protein GI120405969 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.44347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGTA ACCCGCTCGC CGACGACGTC TGGCGCGACC TCGCCGCACT GGTGCTCGAC 
CACCGCGACG GGTGGAAGCG CGCGGTCGTG GAACAATCGG GCCTGCCGTT CAGCAGGATT
CGAATTCTCA AGCGGCTGAG CAAGACGCCG ATGTCGGTCA AACAGTTGGC CGAGGCCGCG
ACCATCGACG CCCCGGCGGC CACGGTCGCG GTCAACGACC TGGAGCAGCG CGGGCTGGTC
GTGCGCACCG TCGATCCGTC GAACCGGCGG TGCAAGACGG TGTCGCTGAC CGAGGCGGGT
CGCGATACCC TCCGAGCCAT CGACGCCGTG CACGATCCGG CCCCGGACAT GCTGGCCGCC
CTCGGCGACG ACGACCTCGC CGCTCTGCGC GTCATCCTGG ACAAACTCGA CGCGGGTTAG
 
Protein sequence
MSGNPLADDV WRDLAALVLD HRDGWKRAVV EQSGLPFSRI RILKRLSKTP MSVKQLAEAA 
TIDAPAATVA VNDLEQRGLV VRTVDPSNRR CKTVSLTEAG RDTLRAIDAV HDPAPDMLAA
LGDDDLAALR VILDKLDAG