| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4940 |
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| Symbol | |
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| ID | 4648925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 5284983 |
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| End bp | 5286596 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639808411 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_955718 |
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| Protein GI | 120405889 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.97423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0157069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGC ACAGCCACCC CGAGATCGTC GGCAAGTTCC TCTCGACGCT GCCCGAGGAT
GACGACCACC CCTACCGGAC CGGTCCGTGG CGGCCGCAGA CCACCGAATG GGACGACGAC
GACCTCAAGG TCGTCGAGGG CCGGATCCCG GACGACCTCG ACGGCGTGTA CCTGCGCAAC
ACCGAGAACC CGCTGCACCC GGCGCTGAAG TACTACCACC CGTTCGACGG CGACGGCATG
CTGCACATCG TCGGATTCCG TGACGGGAAA GCGTTCTACC GCAACAGGTT CGTCCGGACC
GACGCGTTCG CCGAAGAGAA CGAAGCGGGC GGTCCGCTGT GGCCCGGCAT CGCCGAGCCC
CTCGAGTTGG CCCGCCGCGA CTACGGGTGG GGTGCGCGCA CCCTGATGAA GGACGCGTCC
TCCACCGACG TCGTGGTGCA CCGTGGTGTC GCGCTGACCA GCCACTACCA GTGTGGCGAT
CTCTACCGCA TCGACCCGCG CACCGGCGCG GCCCTCGGCA AGGAGGACTG GCACGGCACG
TTCCCGTCCG ACTGGGGCGT GTCCGCCCAC CCGAAGATCG ACGACCACAC CGGTGAGCTG
CTGTTCTTCA ACTACAGCAA GCAGGCGCCC TACATGCGCT ACGGCGTGGT CAGCCCGGCC
GGCGAGGTGG TGCACAACGT CGATGTCCCG CTGCCGGGGC CGCGGCTGCC GCACGACATG
GCGTTCACCG AGAACTACGT GATACTCAAC GACTTTCCGC TGTTCTGGGA CACCGGACTG
CTCGAACACA ACATTCACTT CCCGCGTTTC CACCGGGACA TGCCGTCGCG GTTCGCCGTG
GTCCCCCGCC GCGGCGACAC CTCGCAGATC AAGTGGTTCG AGACCGCTCC CACCTACGTG
CTGCACTTCC CCAACGCCTA CGAGGACGGC GACGAGATCG TGCTGGACGG GTTCTTCCAG
GGCGATCCCG AGCCCACCGA CGGAGTCGAC AACGGGATGA GCGGCAAATG GCGGCAGATC
TTCCGCAGCC TGTCACTGGA CGGTATGCAG ACCCGGCTGC ACCGGTGGCG GTTCAACCTG
GTCACCGGCG AGGCCCGCGA AGAGCAGCTG TCGGACAGCA TCACCGAGTT CGGCATGATC
AACCCCGCGT ATTCCGGGCG CCCCTACCGC TACACGTATG CGGCCACGGG CAAGCCCGGG
TGGTTCCTGT TCGACGGCCT GGTCCGGCAC GACCTGCACA CCGGCACCGA GCAGCGCTAC
GGGTTCGGGG ACGGTGTCTA CGGCAGCGAG ACCGCGATGG CACCCCGCGT GGGCAGCGCG
GCCGCTGACC ACATTGGCGG CTCGGCCGCC GCCCACATTG GCGGCTCGGC CGCCGCCCAC
ATTGGCGGCT CGGCCGCCGA AGACGACGGG TACCTCGTCA CCCTGACCAC CGACATGGCG
GCCGACGCGT CGTACTGCCT GGTGTTCGAC GCGGCGCGGG TGGGTGACGG TCCGGTATGC
AAACTGCAAC TGCCCGAACG GATCTCCAGC GGCACACATT CGACCTGGGC GCCGGGAGCC
GATCTGCCGC AATGGCGCGA GAGCGACTCG GCGGCCGGCG CGATCGGCCT GTAA
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| Protein sequence | MSLHSHPEIV GKFLSTLPED DDHPYRTGPW RPQTTEWDDD DLKVVEGRIP DDLDGVYLRN
TENPLHPALK YYHPFDGDGM LHIVGFRDGK AFYRNRFVRT DAFAEENEAG GPLWPGIAEP
LELARRDYGW GARTLMKDAS STDVVVHRGV ALTSHYQCGD LYRIDPRTGA ALGKEDWHGT
FPSDWGVSAH PKIDDHTGEL LFFNYSKQAP YMRYGVVSPA GEVVHNVDVP LPGPRLPHDM
AFTENYVILN DFPLFWDTGL LEHNIHFPRF HRDMPSRFAV VPRRGDTSQI KWFETAPTYV
LHFPNAYEDG DEIVLDGFFQ GDPEPTDGVD NGMSGKWRQI FRSLSLDGMQ TRLHRWRFNL
VTGEAREEQL SDSITEFGMI NPAYSGRPYR YTYAATGKPG WFLFDGLVRH DLHTGTEQRY
GFGDGVYGSE TAMAPRVGSA AADHIGGSAA AHIGGSAAAH IGGSAAEDDG YLVTLTTDMA
ADASYCLVFD AARVGDGPVC KLQLPERISS GTHSTWAPGA DLPQWRESDS AAGAIGL
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