| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4688 |
|---|
| Symbol | |
|---|
| ID | 4648771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5027883 |
|---|
| End bp | 5028749 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639808158 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_955469 |
|---|
| Protein GI | 120405640 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.602517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG TCAACCGGGC GCTCGTGCTC GCCGGTGGTG GGCTGGCCGG CATCGCCTGG
GAAACCGGTG TGCTGCTGGG GATCTGCGAC GAGTCACCCG ATGCGGGACA GAAGTTGCTC
GCCGCCGACG TCCTGCTCGG CACCTCGGCC GGCTCGGCGG TCGCCGCCCA GGTCGGCAGC
GGGGTGCCGC TGGAGGAACT GTTCGCCCGC CAGCTGTCGG AGGAGCACGG GGCCCACGAG
ATCCACCCGG GTGTGTCGAT CGACGCGATC ACCGACCTGT TCCTGGACGC GATGCTGACC
CAGGGTGCGA CAAAGGCGCA GAAGCTGGCG AAGATCGGTT GCGTCGCCGC AGAGACCGAC
ACGGTCCCGG AGGCGGTGCG CCGCACCGTG ATCGAGCACC GGCTGCCGGC CCATGAGTGG
CCGCAGCGCG CGCTGCGGGT GACCGCGATC GACATCGCGA CAGGTGAACT CGTGGTGTTC
GACGCGGCAT CGGGCGTCGG GTTGGTCGAC GCGGTGGCCG CGAGCTGCGC GGTGCCGGGC
GTCTGGCCGC CGGTCACGAT CGGCGGGCGC CGGTTCATGG ACGGCGGCGT CGGCAGCACG
GTGAACATGT CGGCGGTGCA GGACTGCGGT GCCGCGGTCG TGCTGGTGCC GTCGGGAGCG
AACAGCCCCT CGCCCTGGGG TACGGGCACC GTCGCCGAGA TCGAGGGCTT CCCTGGTGCC
ACGCTGGCGG TGTTCGCCGA CGACGAGTCC CTGGCCGCCT TCGGGGCCAA TCCGCTCGAC
CCCGCATGCC GGGCGCCCGC GGCGCAGGCA GGACGGGCCC AGGGCCGTCG CGAGGCCCGC
AAGGTCGCCG AATTCCTAAG TGTCTGA
|
|---|
| Protein sequence | MTDVNRALVL AGGGLAGIAW ETGVLLGICD ESPDAGQKLL AADVLLGTSA GSAVAAQVGS
GVPLEELFAR QLSEEHGAHE IHPGVSIDAI TDLFLDAMLT QGATKAQKLA KIGCVAAETD
TVPEAVRRTV IEHRLPAHEW PQRALRVTAI DIATGELVVF DAASGVGLVD AVAASCAVPG
VWPPVTIGGR RFMDGGVGST VNMSAVQDCG AAVVLVPSGA NSPSPWGTGT VAEIEGFPGA
TLAVFADDES LAAFGANPLD PACRAPAAQA GRAQGRREAR KVAEFLSV
|
|---|
| |