| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4680 |
|---|
| Symbol | |
|---|
| ID | 4649244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5020945 |
|---|
| End bp | 5021988 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639808150 |
|---|
| Product | 3-hydroxyisobutyryl-CoA hydrolase |
|---|
| Protein accession | YP_955461 |
|---|
| Protein GI | 120405632 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.706752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGAAA ACAAGGATGT CCTAGTAACT GTTCGCAACG GGATCGGGCG CATCACGCTG
AACCGACCCA AGGCGATCAA CTCCCTGACC CATCCGATGG TCACCGACAT CGCACAGGCG
TTGAAGGCCT GGGAGACCGA CGACGCTGTC ACCGCGGTGA TCGTCTCCGG CGCCGGGGAC
CGGGGGCTGT GCGCGGGCGG CGACGTCGTC GCGATCTATC ACGACGCCAG GGCCGGCGGC
TCCGAATCCC GGCGGTTCTG GCACGACGAG TATCTGCTCA ACGCCTACAT CGGCCGCTAC
CCCAAGCCGT ATGTCGCGAT CATGAACGGG ATCACGATGG GCGGCGGCGT CGGGATCAGC
GCGCACGGCA GCGTCCGTGT GGTCACCGAG ACCACCAAGA TGGCGATGCC CGAGGTCGGC
ATCGGCTTCA TCCCCGACGT CGGCGGCACG TTCATCCTGT CGCGGACCCC CGGCCTGCTC
GGCGTGCACG CCGCACTCAC CGGCGCGGCG TTCTCCGGCG CCGACGCCAT CGCGATGGGC
TTCGCCGACC ACTTTGTGCC GCAGGACCGC CTCGCCGCAT TCGCCGACGC GATCGAAGCC
GACGGTGTGG ACGCAGCGGT CGCGGCGTTC GCCCAGGAGC CACCGCCGAG CGCGCTGCTC
GCCCAGCGCG ACTGGATCGA CCACTGCTAC GCCGGCGAGA CGGTTGCCGA CATCGTCGTG
GCGCTGCGCG GCCACGACGC GGAACCCGCG ATTGACGCAG CCGAACTGAT CGAATCCCGC
TCCCCCGTCG CGGCATCCGT CACGCTCGAA GCGGTGCGTC GGGCGGCGAA GCTGGACACA
CTGGAGGACG TGCTGCGCCA GGAGTTCCGG ACGTCGGTGG CGTCCTTGCG CTCACACGAC
CTCGTCGAGG GCATCCGGGC GTTGCTCATC GACAAGGACA AGAACCCCCA GTGGTCGCCC
GCTTCGCTGT CCACGGTGAC CCCGGCAGAC ATCGAGGCGT ATTTCGCCCC CGCCGACCCC
GACCTGACAT TCGACGAGGA GTAA
|
|---|
| Protein sequence | MDENKDVLVT VRNGIGRITL NRPKAINSLT HPMVTDIAQA LKAWETDDAV TAVIVSGAGD
RGLCAGGDVV AIYHDARAGG SESRRFWHDE YLLNAYIGRY PKPYVAIMNG ITMGGGVGIS
AHGSVRVVTE TTKMAMPEVG IGFIPDVGGT FILSRTPGLL GVHAALTGAA FSGADAIAMG
FADHFVPQDR LAAFADAIEA DGVDAAVAAF AQEPPPSALL AQRDWIDHCY AGETVADIVV
ALRGHDAEPA IDAAELIESR SPVAASVTLE AVRRAAKLDT LEDVLRQEFR TSVASLRSHD
LVEGIRALLI DKDKNPQWSP ASLSTVTPAD IEAYFAPADP DLTFDEE
|
|---|
| |