Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4572 |
Symbol | |
ID | 4649036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4910200 |
End bp | 4910904 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639808042 |
Product | TetR family transcriptional regulator |
Protein accession | YP_955353 |
Protein GI | 120405524 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.224675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACG TCAGCGCCCC ACGGCAGCGA CGGCACCGCG CCCCCCGCGG CGCCGGTGAG CAGTTGCGCG CCGAGATCCT CGATGCGGCA ACCGATCTCC TTCTGGAGAC CGGCGACGAG AAAGCGGTGT CGATCAGGTC GGTGGCGCAG CGGGTCGGTG TGACCCCGCC GTCGATCTAT CTGCATTTCG TCGACAAGAC CGCGCTGCTG GACGCGGTGT GCGGCAGGTA CTTCGAGAAG CTCGACGAGG AGATGCAGGA GGTCGCCGGC GCCGCCGCCA CGGCCCTCGA CGTGCTGCGG GCCCAGGGGA TGGCCTACGT GCGATTCGCG CTGAAAAACC CTGTGCTGTA CCGCATCGCG ATGATGGGCC CCGGAAGCCC GGGCAGCGAC GTCGACGTCG CGCTCAACAG TTCGGCGTTC GGCCACCTGC TGATGTCGGT GCAGGCGCTG ATCGCCGAGG GCGTCTATCC GCAGGCAGAC CCGACCATGC TCGCGTTGGA ACTCTGGACG GCCGTGCACG GTATCGCCGC GATGCTCATC TCCCGCCCGT ATCTACCCTG GGGTGGCGCC GAGGAGTTCG CCGATCGCCT GATGCGCGCG GTCTGCTGCG GCCAAGCCCT GTCAGTCGCG ATCCGGCCGG ACGAGTCGCC GCGGGAGATC ATGACCTGGT TGAAGGAGGT AGTCGATGAA CGACAGCGTG GATAA
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Protein sequence | MADVSAPRQR RHRAPRGAGE QLRAEILDAA TDLLLETGDE KAVSIRSVAQ RVGVTPPSIY LHFVDKTALL DAVCGRYFEK LDEEMQEVAG AAATALDVLR AQGMAYVRFA LKNPVLYRIA MMGPGSPGSD VDVALNSSAF GHLLMSVQAL IAEGVYPQAD PTMLALELWT AVHGIAAMLI SRPYLPWGGA EEFADRLMRA VCCGQALSVA IRPDESPREI MTWLKEVVDE RQRG
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