| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4515 |
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| Symbol | |
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| ID | 4646832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 4850694 |
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| End bp | 4851758 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639807985 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_955296 |
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| Protein GI | 120405467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.113007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.287636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGACC TACACGGCGA CCCGATCGCG CTGACCGCCG CGCTGGTGGA CATCCCGAGC
GAGTCGCGCC ACGAGAAGCG CATCGCCGAC GAGATCGAGA CCGCGCTGCG CGAACAGACC
GCCGGGTTCG AGATCGTCCG CAACGGTGAC GCCGTGCTGG CCCGCACCGA CTTCGGCAGG
CCGTCGCGGG TGCTGCTGGC CGGACACATC GACACCGTGC CCGCGGCCGA CAACCTGCCC
AGCAGGCTGG CCGACGGCGT ACTGCACGGC TGCGGAACCT CGGACATGAA GGCCGGTGAC
GCGGTGTTCC TGCACCTGGC CGCCACCGTC GCCGAACCCG CCCACGACAT CACGCTGGTG
ATGTACGACT GTGAGGAGAT CGAGGCCTCC GCCAACGGGC TCGGCCGCAT CGAACGCGAG
CTACCCGAGT GGCTGGCCGC CGACGTCGCG ATCCTCGGCG AACCGTCCGG CGGATTGATC
GAGGCCGGCT GTCAGGGCAC CCTGCGGGTG ATCGTCAGAG CGACGGGCAC CCGCGCGCAT
TCCGCCCGAT CCTGGTTGGG CGACAACGCG ATTCACAAGC TGAGCGACGT TCTCGCCCGT
CTGCGGTCCT ATCAGGCCCG CAGTGTCGAC ATCGACGGCT GCGTCTACCG CGAGGGGTTG
TCGGCGGTGC GCATCGACGG AGGTGTCGCC GGCAACGTCA TCCCCGACGC GGCGAGTGTC
ACGGTCAACT TCCGTTTCGC CCCGGACCGC AGCGTCGAGC AGGCGTACGC CCACGTGCGC
GAGGTGTTCG ACAGGCTCGA CGTCACGATC GAGCTCACCG ACGCCGCCGC GGGCGCGCTG
CCCGGGTTGA CCCGGCCGGC CGCGGCCGCG CTCGTCGAGG CTGCCGGTGG CCAGGTGCGC
GCGAAGTACG GCTGGACCGA CGTGTCCCGG TTCGCCGCGC TGGGAATCCC GGCGGTCAAC
TACGGCCCGG GCGACCCGAA CCTCGCGCAC CGCGTCGACG AGAGCGTCGA CGTCGCGCAG
ATCACCGCGG TCACCGACAT GCTGAGGCGC TACTTAATCG GTTGA
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| Protein sequence | MLDLHGDPIA LTAALVDIPS ESRHEKRIAD EIETALREQT AGFEIVRNGD AVLARTDFGR
PSRVLLAGHI DTVPAADNLP SRLADGVLHG CGTSDMKAGD AVFLHLAATV AEPAHDITLV
MYDCEEIEAS ANGLGRIERE LPEWLAADVA ILGEPSGGLI EAGCQGTLRV IVRATGTRAH
SARSWLGDNA IHKLSDVLAR LRSYQARSVD IDGCVYREGL SAVRIDGGVA GNVIPDAASV
TVNFRFAPDR SVEQAYAHVR EVFDRLDVTI ELTDAAAGAL PGLTRPAAAA LVEAAGGQVR
AKYGWTDVSR FAALGIPAVN YGPGDPNLAH RVDESVDVAQ ITAVTDMLRR YLIG
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