Gene Mvan_4400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4400 
Symbol 
ID4648739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4722227 
End bp4723072 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content63% 
IMG OID639807871 
Producthypothetical protein 
Protein accessionYP_955182 
Protein GI120405353 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.422762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCGG TGAGCCCCCC GCTTCGGTTG CAGCGCAGAC TGTCTCAGTG GGCGGCCGGG 
TTGGACCGGC TCGGCCTGCA AACGTTGTTC TATGGCCATA CGCTGCGCTC CACCGGCGAC
GCGGCCATTC ACTACCGCGC GGAGATTCTG AGACAGATCG CGCAGATGGG CTTCGGTGTC
GGCGCCTTGG CGGCGATCGG CGGTACCGTC GTCATCGTCA GCTTTCTCAC TGTGTCGGTG
GGAGCCCTGG TCGCGGTCAT CGGCTTCAAT CAGTTGTCCC AGGTCGGGGT CGAAGCTCTG
ACCGGATTCA TCTCGGCCTT CTTCAACGTG CGATTGATCG GACCGCTGAT CGCGGGCATA
GCCCTGGCTG CCACCATCGG CGCCGGAACA ACTGCGCAGC TCGGCGCGAT GCGGATCAAC
GAAGAGATCG ACGCCCTTGA GGTGATGGGT GTGCGATCAG TCTCCTATCT GGCCTCGACC
CGGTTGATCG CTGGAACTCT CGTGGTCGTC CCGCTGTACT GCGTTGCGCT GATCAGTGCG
TTCGTCGCCG CGAAGGTGGG CACCACGGTG TTCTACGGCC AGTCAGTCGG CGTCTATGAG
CACTACTTCT ATACCTTCCT CAACCCCGAC AGCGTGGTCT GGTCTTTTTT GCTTGCCGTG
ACCATGGCAG TGGTCATCAT GCTCGTGCAC ACCTACTACG GTTTCAACGC GGCCGGGGGA
CCAGCCGGGG TCGGCCAGGC AGTCGGTCAG TCGGTACGAG CCTCACTCGT CGCGGCGACG
GTGATGACGA TGTTTGTCTC CCTGGCCTTG TACGGCCAGA CCGGCGACTT CAACTTCTCG
GGTTAG
 
Protein sequence
MSAVSPPLRL QRRLSQWAAG LDRLGLQTLF YGHTLRSTGD AAIHYRAEIL RQIAQMGFGV 
GALAAIGGTV VIVSFLTVSV GALVAVIGFN QLSQVGVEAL TGFISAFFNV RLIGPLIAGI
ALAATIGAGT TAQLGAMRIN EEIDALEVMG VRSVSYLAST RLIAGTLVVV PLYCVALISA
FVAAKVGTTV FYGQSVGVYE HYFYTFLNPD SVVWSFLLAV TMAVVIMLVH TYYGFNAAGG
PAGVGQAVGQ SVRASLVAAT VMTMFVSLAL YGQTGDFNFS G